D. rerio Gene: mef2d - ENSDARG00000040237 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040237
Namemef2d
Descriptionmyocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
OrganismDanio rerio (zebrafish)
Synonym(s)etid309781.16, fk53b11, wu:fc50h03, wu:fk53b11, zgc:109833

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
233
  • 233
  • 1.65e4
99.22
  • 99.22
  • 44.67
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.49
  • 96.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.58
  • 94.58
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.36e3
  • 2.36e3
  • 2.81e3
92.10
  • 92.10
  • 90.61
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
  • 4.20e3
91.55
  • 91.55
  • 85.93
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.58e3
  • 2.58e3
  • 2.59e3
  • 4.12e3
  • 5.08e3
  • 5.24e3
  • 9.74e3
  • 1.20e4
  • 1.31e4
91.36
  • 91.36
  • 91.34
  • 86.21
  • 82.99
  • 82.47
  • 67.40
  • 59.67
  • 56.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.94e3
  • 2.94e3
  • 1.48e4
90.17
  • 90.17
  • 50.57
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.51
  • 87.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.86
  • 84.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.96
  • 81.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.63e3
  • 6.63e3
  • 1.18e4
  • 1.27e4
77.80
  • 77.80
  • 60.55
  • 57.36
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000858fast muscle myoblast
  • ZFS:0000026Segmentation:14-19 somites
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002531paired fin bud
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.62e3
  • 7.62e3
74.49
  • 74.49
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.69e3
  • 7.69e3
74.25
  • 74.25
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.76e3
  • 7.76e3
74.02
  • 74.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.90
  • 73.90
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.40e3
  • 8.40e3
  • 1.34e4
71.88
  • 71.88
  • 55.12
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.51e3
  • 8.51e3
71.51
  • 71.51
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
9.34e3
  • 9.34e3
  • 1.19e4
  • 1.33e4
  • 1.49e4
68.74
  • 68.74
  • 60.00
  • 55.53
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
  • 1.06e4
  • 1.06e4
  • 1.15e4
  • 1.29e4
  • 1.29e4
  • 1.31e4
  • 1.36e4
  • 1.36e4
  • 1.38e4
  • 1.41e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
67.41
  • 67.41
  • 64.62
  • 64.38
  • 61.42
  • 56.73
  • 56.69
  • 56.25
  • 54.60
  • 54.39
  • 53.92
  • 52.92
  • 50.90
  • 50.61
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.87e3
  • 9.87e3
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0002199integument
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
  • 1.07e4
  • 1.49e4
66.67
  • 66.67
  • 64.23
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.06e4
  • 1.06e4
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.32
  • 64.32
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.08e4
  • 1.08e4
  • 1.75e4
63.78
  • 63.78
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
CL:0000189slow muscle cell
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
CL:0000190fast muscle cell
  • ZFS:0000029Pharyngula:Prim-5
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.20e4
  • 1.20e4
  • 1.31e4
  • 1.37e4
  • 1.39e4
59.98
  • 59.98
  • 56.24
  • 54.13
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
1.25e4
  • 1.25e4
58.31
  • 58.31
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
  • 1.39e4
57.11
  • 57.11
  • 53.55
AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002407pericardium
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001601extra-ocular muscle
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001431primitive olfactory epithelium
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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