D. rerio Gene: kpnb3 - ENSDARG00000040245 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040245
Namekpnb3
Descriptionkaryopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb273, fc38a10, wu:fc38a10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
223
  • 223
  • 336
  • 392
  • 392
  • 436
  • 443
99.26
  • 99.26
  • 98.88
  • 98.69
  • 98.69
  • 98.54
  • 98.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
271
  • 271
99.10
  • 99.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
278
  • 278
  • 713
  • 1.01e3
  • 3.40e3
  • 1.30e4
  • 1.34e4
99.07
  • 99.07
  • 97.62
  • 96.63
  • 88.63
  • 56.49
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
311
  • 311
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
340
  • 340
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
391
  • 391
  • 518
  • 532
  • 652
  • 724
  • 792
  • 825
  • 1.10e3
  • 1.19e3
  • 1.38e3
98.69
  • 98.69
  • 98.27
  • 98.22
  • 97.82
  • 97.58
  • 97.35
  • 97.24
  • 96.31
  • 96.03
  • 95.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
394
  • 394
  • 408
  • 493
  • 776
  • 807
98.68
  • 98.68
  • 98.64
  • 98.35
  • 97.40
  • 97.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
438
  • 438
  • 1.20e4
  • 1.20e4
  • 1.24e4
  • 1.25e4
98.54
  • 98.54
  • 59.98
  • 59.98
  • 58.58
  • 58.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
447
  • 447
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
455
  • 455
  • 508
  • 546
  • 567
  • 578
  • 714
  • 958
  • 1.09e3
  • 1.10e3
  • 1.26e3
  • 1.65e3
  • 1.96e3
  • 2.80e3
  • 3.57e3
98.48
  • 98.48
  • 98.30
  • 98.18
  • 98.10
  • 98.07
  • 97.61
  • 96.80
  • 96.34
  • 96.31
  • 95.79
  • 94.49
  • 93.44
  • 90.64
  • 88.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
515
  • 515
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
529
  • 529
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
554
  • 554
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
677
  • 677
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
816
  • 816
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
856
  • 856
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
958
  • 958
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
975
  • 975
  • 1.54e3
96.74
  • 96.74
  • 94.85
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.63
  • 96.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
  • 3.77e3
96.20
  • 96.20
  • 87.37
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.23
  • 95.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.91
  • 94.91
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.58e3
  • 1.58e3
  • 1.64e3
  • 2.18e3
94.72
  • 94.72
  • 94.51
  • 92.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.74e3
  • 1.74e3
  • 1.31e4
  • 1.35e4
94.19
  • 94.19
  • 56.23
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.86e3
  • 1.86e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
  • 3.91e3
93.13
  • 93.13
  • 86.89
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.28e3
  • 2.28e3
  • 3.07e3
92.38
  • 92.38
  • 89.71
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.95
  • 84.95
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.63
  • 67.48
  • 66.65
  • 66.65
  • 66.65
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.21
  • 70.21
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000026Segmentation:14-19 somites
9.60e3
  • 9.60e3
67.85
  • 67.85
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
  • 1.07e4
  • 1.12e4
64.27
  • 64.27
  • 64.27
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.42
  • 49.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR352215, CR847928
EnsemblENSDARG00000040245 (kpnb3)
Uniprot/SPTREMBLB8JHR9, B8JHR9_DANRE
ZFINZDB-GENE-030424-2 (kpnb3)

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