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D. rerio Gene: crata - ENSDARG00000040248 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040248
Namecrata
Descriptioncarnitine O-acetyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040927-17]
OrganismDanio rerio (zebrafish)
Synonym(s)hm:zeh0248, zeh0248, zgc:92317
Orthologs(s)29 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.67e3
  • 2.67e3
91.07
  • 91.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
3.33e3
  • 3.33e3
  • 4.77e3
  • 1.21e4
88.85
  • 88.85
  • 84.01
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.38
  • 88.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.85
  • 86.85
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
3.96e3
  • 3.96e3
  • 1.10e4
  • 1.17e4
  • 1.28e4
  • 1.32e4
  • 1.56e4
  • 1.78e4
86.73
  • 86.73
  • 63.24
  • 60.82
  • 57.13
  • 55.84
  • 47.91
  • 40.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
5.17e3
  • 5.17e3
  • 6.81e3
  • 7.89e3
  • 8.11e3
  • 1.14e4
82.70
  • 82.70
  • 77.19
  • 73.57
  • 72.84
  • 61.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.31e3
  • 5.31e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.50e3
  • 5.50e3
  • 7.65e3
  • 1.60e4
81.57
  • 81.57
  • 74.39
  • 46.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.65
  • 80.65
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
  • 7.52e3
80.30
  • 80.30
  • 74.81
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.24
  • 80.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
77.51
  • 77.51
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.05e3
  • 7.05e3
  • 1.43e4
76.41
  • 76.41
  • 52.26
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.88
  • 75.88
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.55
  • 75.55
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.70e3
  • 7.70e3
  • 9.63e3
  • 1.03e4
74.21
  • 74.21
  • 67.75
  • 65.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0004707pharyngula stage
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
  • 9.45e3
  • 9.54e3
  • 1.11e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.24e4
  • 1.29e4
  • 1.29e4
  • 1.38e4
  • 1.42e4
  • 1.42e4
  • 1.42e4
  • 1.44e4
  • 1.44e4
  • 1.44e4
  • 1.45e4
  • 1.46e4
  • 1.48e4
  • 1.50e4
70.87
  • 70.87
  • 68.35
  • 68.04
  • 62.74
  • 59.31
  • 59.08
  • 59.08
  • 59.08
  • 58.32
  • 58.32
  • 56.65
  • 56.65
  • 53.88
  • 52.43
  • 52.36
  • 52.31
  • 51.90
  • 51.90
  • 51.79
  • 51.57
  • 51.24
  • 50.35
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.16e3
  • 9.16e3
69.31
  • 69.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.30
  • 66.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.48
  • 65.48
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.11e4
  • 1.11e4
  • 1.41e4
  • 1.54e4
62.72
  • 62.72
  • 52.81
  • 48.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.13e4
  • 1.13e4
  • 1.38e4
62.30
  • 62.30
  • 53.74
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
57.19
  • 57.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species29 genesCompare expression

Orthology information comes from OMA : ENSDARG00000040248.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Bilateria2 genesCompare expression
Opisthokonta10 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000040248.

Cross-references

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