D. rerio Gene: tlr18 - ENSDARG00000040249 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040249
Nametlr18
Descriptiontoll-like receptor 18 [Source:ZFIN;Acc:ZDB-GENE-040220-2]
OrganismDanio rerio (zebrafish)
Synonym(s)tir1.1, tlr1.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.50e4
64.28
  • 64.28
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.14e4
  • 1.14e4
  • 1.39e4
61.82
  • 61.82
  • 53.51
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.04
  • 52.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.04
  • 51.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.10
  • 50.10
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.55e4
  • 1.55e4
48.13
  • 48.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.56e4
  • 1.56e4
47.74
  • 47.74
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.21
  • 44.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.70
  • 40.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.90
  • 39.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.35
  • 37.35
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.92e4
  • 1.92e4
  • 1.97e4
  • 2.09e4
  • 2.09e4
35.82
  • 35.82
  • 33.94
  • 30.02
  • 29.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.98e4
  • 1.98e4
  • 2.04e4
33.60
  • 33.60
  • 31.83
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.89
  • 26.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAL954306
EnsemblENSDARG00000040249 (tlr18)
Uniprot/SPTREMBLA3KH14, A3KH14_DANRE
ZFINZDB-GENE-040220-2 (tlr18)

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