D. rerio Gene: slc38a11 - ENSDARG00000040257 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040257
Nameslc38a11
Descriptionsolute carrier family 38, member 11 [Source:ZFIN;Acc:ZDB-GENE-050417-122]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110221

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.83
  • 81.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.93e3
  • 8.93e3
  • 9.16e3
70.11
  • 70.11
  • 69.34
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.21
  • 68.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e4
  • 1.08e4
63.87
  • 63.87
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.46
  • 62.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.12e4
  • 1.12e4
62.41
  • 62.41
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.65
  • 60.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.15
  • 57.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.28
  • 53.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.08
  • 49.08
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.51
  • 43.51
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.71e4
  • 1.71e4
  • 1.97e4
  • 2.13e4
  • 2.18e4
  • 2.47e4
42.84
  • 42.84
  • 34.09
  • 28.77
  • 26.84
  • 17.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.73e4
  • 1.73e4
  • 2.27e4
42.12
  • 42.12
  • 24.02
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
  • 2.18e4
32.21
  • 32.21
  • 27.07
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.34
  • 26.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.94
  • 25.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU062479
EnsemblENSDARG00000040257 (slc38a11)
Uniprot/SPTREMBLA0A0H2UKD9, A0A0H2UKD9_DANRE
ZFINZDB-GENE-050417-122 (slc38a11)

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