D. rerio Gene: zgc:92590 - ENSDARG00000040282 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040282
Namezgc:92590
Descriptionzgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fd14c02
Orthologs(s)7 orthologs
Paralog(s)64 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
55.0
  • 55.0
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
177
  • 177
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
223
  • 223
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.17
  • 90.17
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.71
  • 86.71
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.83e3
  • 5.83e3
  • 1.62e4
  • 1.80e4
80.48
  • 80.48
  • 45.71
  • 39.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
72.91
  • 72.91
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
9.34e3
  • 9.34e3
  • 9.96e3
  • 1.37e4
  • 1.37e4
  • 1.37e4
  • 1.38e4
  • 1.43e4
  • 1.51e4
  • 1.51e4
68.74
  • 68.74
  • 66.66
  • 54.23
  • 54.10
  • 54.07
  • 53.63
  • 52.10
  • 49.41
  • 49.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
9.44e3
  • 9.44e3
  • 1.45e4
  • 1.92e4
  • 2.02e4
  • 2.04e4
68.39
  • 68.39
  • 51.59
  • 35.76
  • 32.51
  • 31.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
9.96e3
  • 9.96e3
  • 1.12e4
66.66
  • 66.66
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.04
  • 59.04
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.23e4
  • 1.23e4
58.75
  • 58.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.65
  • 58.65
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
1.32e4
  • 1.32e4
  • 1.39e4
  • 1.61e4
55.66
  • 55.66
  • 53.53
  • 45.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.10
  • 47.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.50
  • 42.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.10
  • 41.10
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.14
  • 39.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.79
  • 33.79
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.98e4
  • 1.98e4
  • 2.11e4
33.67
  • 33.67
  • 29.19
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.02
  • 27.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Opisthokonta64 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000040282.

Cross-references

EnsemblENSDARG00000040282 (zgc:92590)
ZFINZDB-GENE-041024-15 (zgc:92590)
EMBLCU062628
Uniprot/SPTREMBLF1R1X9, F1R1X9_DANRE

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