D. rerio Gene: cadm4 - ENSDARG00000040291 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040291
Namecadm4
Descriptioncell adhesion molecule 4 [Source:ZFIN;Acc:ZDB-GENE-041114-138]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101704

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
  • 1.32e4
  • 1.37e4
94.87
  • 94.87
  • 55.88
  • 54.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
  • 4.09e3
94.20
  • 94.20
  • 86.30
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
2.55e3
  • 2.55e3
  • 4.57e3
  • 7.78e3
  • 8.37e3
  • 9.78e3
  • 1.41e4
  • 1.78e4
  • 1.81e4
91.46
  • 91.46
  • 84.69
  • 73.95
  • 71.99
  • 67.25
  • 52.71
  • 40.27
  • 39.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
3.74e3
  • 3.74e3
  • 1.28e4
87.49
  • 87.49
  • 56.99
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
4.36e3
  • 4.36e3
  • 9.56e3
  • 9.74e3
85.40
  • 85.40
  • 68.00
  • 67.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.34e3
  • 5.34e3
  • 8.71e3
82.14
  • 82.14
  • 70.82
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000032Pharyngula:High-pec
6.89e3
  • 6.89e3
  • 7.47e3
  • 8.40e3
  • 8.71e3
  • 9.19e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
76.92
  • 76.92
  • 74.99
  • 71.86
  • 70.82
  • 69.22
  • 66.66
  • 66.65
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.74e3
  • 7.74e3
74.07
  • 74.07
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
7.86e3
  • 7.86e3
  • 8.96e3
  • 9.34e3
  • 9.34e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
73.67
  • 73.67
  • 69.99
  • 68.74
  • 68.74
  • 66.65
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.72
  • 72.72
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
8.16e3
  • 8.16e3
  • 1.16e4
  • 1.25e4
  • 1.31e4
  • 1.46e4
  • 1.47e4
  • 1.50e4
  • 1.52e4
  • 1.56e4
  • 1.56e4
  • 1.57e4
  • 1.57e4
72.69
  • 72.69
  • 61.13
  • 58.09
  • 56.22
  • 51.12
  • 50.90
  • 49.80
  • 49.15
  • 47.83
  • 47.66
  • 47.47
  • 47.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.16e3
  • 8.16e3
72.67
  • 72.67
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.40e3
  • 8.40e3
  • 8.54e3
  • 8.54e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 1.07e4
71.86
  • 71.86
  • 71.42
  • 71.42
  • 69.99
  • 69.99
  • 66.66
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
8.54e3
  • 8.54e3
  • 8.83e3
  • 9.44e3
  • 9.51e3
  • 9.71e3
  • 9.71e3
  • 1.05e4
71.41
  • 71.41
  • 70.44
  • 68.40
  • 68.16
  • 67.48
  • 67.48
  • 64.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
71.15
  • 71.15
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.65e3
  • 8.65e3
  • 9.13e3
  • 9.34e3
  • 9.44e3
  • 9.44e3
  • 1.08e4
  • 1.12e4
71.04
  • 71.04
  • 69.43
  • 68.73
  • 68.40
  • 68.40
  • 63.87
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 8.96e3
  • 9.10e3
  • 9.25e3
  • 9.61e3
  • 1.05e4
  • 1.10e4
69.98
  • 69.98
  • 69.98
  • 69.55
  • 69.03
  • 67.83
  • 64.98
  • 63.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.57
  • 69.57
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.10e3
  • 9.10e3
  • 9.34e3
  • 9.44e3
  • 9.51e3
  • 9.75e3
  • 1.14e4
  • 1.16e4
69.55
  • 69.55
  • 68.73
  • 68.40
  • 68.16
  • 67.37
  • 61.75
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
9.13e3
  • 9.13e3
  • 9.34e3
  • 9.67e3
  • 9.67e3
  • 9.67e3
  • 1.03e4
  • 1.12e4
69.43
  • 69.43
  • 68.74
  • 67.63
  • 67.63
  • 67.63
  • 65.61
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.42e3
  • 9.42e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.67e3
  • 9.67e3
  • 9.67e3
  • 9.67e3
67.63
  • 67.63
  • 67.63
  • 67.63
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000100motor neuron
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000203pallium
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
65.01
  • 65.01
AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.10e4
64.28
  • 64.28
  • 63.32
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.16e4
  • 1.16e4
  • 1.49e4
61.10
  • 61.10
  • 49.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0003065ciliary marginal zone
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0007287presumptive bulbus arteriosus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.19e4
  • 1.19e4
  • 1.49e4
60.00
  • 60.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.20e4
  • 1.20e4
  • 1.23e4
59.70
  • 59.70
  • 58.84
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.21e4
  • 1.21e4
  • 1.43e4
59.55
  • 59.55
  • 52.19
AEIR
  • AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.24e4
  • 1.24e4
  • 1.49e4
58.33
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001900ventral thalamus
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000033Hatching:Long-pec
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0001904habenula
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.73
  • 54.73
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000033Hatching:Long-pec
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.42e4
  • 1.42e4
  • 1.75e4
52.34
  • 52.34
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:2000599torus semicircularis
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000603valvula cerebelli
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000745retina horizontal cell
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005723floor plate spinal cord region
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001391anterior lateral line ganglion
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001701glossopharyngeal ganglion
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001944pretectal region
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002309medial longitudinal fasciculus
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001302vagal ganglion 1
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001314posterior lateral line ganglion
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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