D. rerio Gene: apoa4b.1 - ENSDARG00000040298 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040298
Nameapoa4b.1
Descriptionapolipoprotein A-IV b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1263]
OrganismDanio rerio (zebrafish)
Synonym(s)apo a-iv, apoa4, wu:fb64f03, wu:fb66f09, zgc:122983

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
152
  • 152
  • 9.34e3
99.50
  • 99.50
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
248
  • 248
  • 258
  • 296
  • 301
  • 320
  • 355
  • 481
  • 575
  • 1.05e3
  • 1.16e3
99.17
  • 99.17
  • 99.14
  • 99.01
  • 99.00
  • 98.93
  • 98.81
  • 98.39
  • 98.08
  • 96.47
  • 96.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
290
  • 290
  • 364
  • 419
99.03
  • 99.03
  • 98.79
  • 98.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
315
  • 315
  • 9.96e3
  • 1.12e4
98.95
  • 98.95
  • 66.67
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000104life cycle
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
392
  • 392
  • 420
  • 440
  • 502
  • 504
  • 692
  • 817
  • 1.74e3
  • 4.64e3
  • 7.16e3
  • 9.95e3
  • 1.06e4
  • 1.08e4
  • 1.29e4
  • 1.39e4
  • 1.39e4
  • 1.55e4
98.69
  • 98.69
  • 98.60
  • 98.53
  • 98.32
  • 98.32
  • 97.69
  • 97.27
  • 94.18
  • 84.45
  • 76.02
  • 66.70
  • 64.37
  • 63.88
  • 56.79
  • 53.30
  • 53.30
  • 48.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
456
  • 456
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
637
  • 637
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.31e3
  • 1.31e3
  • 1.38e4
95.62
  • 95.62
  • 53.71
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.54e3
  • 2.54e3
  • 7.77e3
91.49
  • 91.49
  • 74.00
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.23e3
  • 3.23e3
  • 1.44e4
  • 1.72e4
  • 1.75e4
89.19
  • 89.19
  • 51.75
  • 42.33
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.40e3
  • 6.40e3
  • 6.97e3
  • 1.09e4
  • 1.14e4
  • 1.15e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
78.56
  • 78.56
  • 76.66
  • 63.61
  • 61.88
  • 61.53
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
  • 2.21e4
74.89
  • 74.89
  • 26.10
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
7.97e3
  • 7.97e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.34e3
  • 9.67e3
  • 1.05e4
  • 1.05e4
  • 1.14e4
  • 1.23e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
73.32
  • 73.32
  • 69.99
  • 69.99
  • 69.99
  • 68.74
  • 67.63
  • 64.69
  • 64.69
  • 61.75
  • 58.80
  • 57.68
  • 57.14
  • 57.13
  • 57.13
  • 57.13
  • 57.13
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
63.54
  • 63.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.24
  • 61.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.94
  • 60.94
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.30
  • 44.30
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.98
  • 37.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX004983
EnsemblENSDARG00000040298 (apoa4b.1)
Uniprot/SPTREMBLF1QHR0, F1QHR0_DANRE
ZFINZDB-GENE-030131-1263 (apoa4b.1)

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