D. rerio Gene: DHX29 - ENSDARG00000040326 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040326
NameDHX29
DescriptionDEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:HGNC Symbol;Acc:HGNC:15815]
OrganismDanio rerio (zebrafish)
Synonym(s)ddx29
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
5.12e3
  • 5.12e3
  • 7.14e3
  • 7.33e3
  • 8.72e3
  • 9.25e3
  • 9.53e3
82.85
  • 82.85
  • 76.08
  • 75.46
  • 70.79
  • 69.04
  • 68.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
5.32e3
  • 5.32e3
  • 5.94e3
  • 5.99e3
  • 9.09e3
  • 9.31e3
82.18
  • 82.18
  • 80.11
  • 79.94
  • 69.56
  • 68.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.51e3
  • 5.51e3
81.54
  • 81.54
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.40
  • 80.40
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.20
  • 80.20
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.46e3
  • 6.46e3
  • 8.28e3
  • 8.64e3
  • 1.27e4
78.38
  • 78.38
  • 72.29
  • 71.08
  • 57.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.25e3
  • 7.25e3
75.73
  • 75.73
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.09e3
  • 8.09e3
  • 1.01e4
72.90
  • 72.90
  • 66.34
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.89
  • 72.89
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.72
  • 70.72
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.75e3
  • 8.75e3
70.71
  • 70.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.94e3
  • 8.94e3
70.07
  • 70.07
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.04e3
  • 9.04e3
69.73
  • 69.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
69.41
  • 69.41
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
9.14e3
  • 9.14e3
  • 9.15e3
  • 9.24e3
  • 9.54e3
  • 9.72e3
  • 9.87e3
  • 1.01e4
  • 1.04e4
  • 1.06e4
  • 1.44e4
69.41
  • 69.41
  • 69.35
  • 69.06
  • 68.06
  • 67.45
  • 66.96
  • 66.10
  • 65.31
  • 64.48
  • 51.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.44e3
  • 9.44e3
68.39
  • 68.39
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
  • 1.28e4
67.98
  • 67.98
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
9.70e3
  • 9.70e3
  • 9.79e3
  • 9.85e3
  • 9.94e3
  • 9.95e3
  • 9.97e3
  • 1.04e4
  • 1.05e4
  • 1.09e4
  • 1.13e4
  • 1.14e4
  • 1.15e4
  • 1.22e4
  • 1.28e4
67.54
  • 67.54
  • 67.20
  • 67.02
  • 66.73
  • 66.70
  • 66.62
  • 65.14
  • 64.91
  • 63.42
  • 62.16
  • 61.78
  • 61.62
  • 59.31
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.47
  • 67.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.28
  • 63.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
  • 1.14e4
62.99
  • 62.99
  • 61.91
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.16e4
  • 1.16e4
  • 1.19e4
  • 1.20e4
61.06
  • 61.06
  • 60.00
  • 59.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.54
  • 59.54
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.10
  • 59.10
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
  • 1.77e4
58.77
  • 58.77
  • 40.84
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.24
  • 58.24
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.80
  • 50.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000040326 (DHX29)
HGNCHGNC:15815 (DHX29)
Uniprot/SPTREMBLE7F525, E7F525_DANRE

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