D. rerio Gene: crot - ENSDARG00000040352 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040352
Namecrot
Descriptioncarnitine O-octanoyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-35]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110643

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.79
  • 93.79
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.83
  • 87.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
4.77e3
  • 4.77e3
  • 9.58e3
  • 1.21e4
84.02
  • 84.02
  • 67.92
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.35
  • 83.35
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
81.49
  • 81.49
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.64e3
  • 5.64e3
  • 8.76e3
81.10
  • 81.10
  • 70.68
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
5.81e3
  • 5.81e3
  • 9.58e3
  • 9.80e3
  • 9.96e3
  • 1.13e4
80.56
  • 80.56
  • 67.94
  • 67.18
  • 66.64
  • 62.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.35
  • 78.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.79
  • 76.79
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
  • 1.15e4
76.68
  • 76.68
  • 61.52
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.74
  • 75.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.54
  • 75.54
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.13e3
  • 8.13e3
72.77
  • 72.77
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.29e3
  • 8.29e3
72.25
  • 72.25
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.41e3
  • 8.41e3
71.85
  • 71.85
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.51e3
  • 8.51e3
  • 8.68e3
71.52
  • 71.52
  • 70.94
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.57
  • 69.57
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.32e3
  • 9.32e3
68.79
  • 68.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.35e3
  • 9.35e3
  • 1.05e4
68.69
  • 68.69
  • 64.68
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.14
  • 64.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.62
  • 63.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX322614
EnsemblENSDARG00000040352 (crot)
Uniprot/SPTREMBLF1QAI1, F1QAI1_DANRE
ZFINZDB-GENE-050522-35 (crot)

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