D. rerio Gene: nptxra - ENSDARG00000040430 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040430
Namenptxra
Descriptionneuronal pentraxin receptor a [Source:ZFIN;Acc:ZDB-GENE-050208-280]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7147393

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.33
  • 91.33
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.05e3
  • 3.05e3
89.78
  • 89.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
7.32e3
  • 7.32e3
  • 1.29e4
  • 1.57e4
  • 1.79e4
  • 1.81e4
75.50
  • 75.50
  • 56.69
  • 47.54
  • 40.02
  • 39.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.90e3
  • 8.90e3
  • 1.71e4
70.20
  • 70.20
  • 42.73
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.44
  • 26.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.65
  • 25.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR790377
EnsemblENSDARG00000040430 (nptxra)
Uniprot/SPTREMBLE7F744, E7F744_DANRE
ZFINZDB-GENE-050208-280 (nptxra)

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