D. rerio Gene: cga - ENSDARG00000040479 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040479
Namecga
Descriptionglycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
OrganismDanio rerio (zebrafish)
Synonym(s)gonadotropin alpha subunit, gpha, gsu-alpha, gth-alpha

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.19
  • 94.19
AEIR
  • AEIR
UBERON:0009122adenohypophyseal placode
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 8.96e3
  • 1.07e4
75.00
  • 75.00
  • 70.00
  • 64.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
8.96e3
  • 8.96e3
  • 9.96e3
69.99
  • 69.99
  • 66.65
AEIR
  • AEIR
  • AEIR
CL:0000476thyrotroph
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000038Larval:Day 6
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.47e4
  • 1.47e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
50.68
  • 50.68
  • 39.85
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000438luteinizing hormone secreting cell
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.54e4
  • 1.54e4
  • 1.80e4
48.59
  • 48.59
  • 39.79
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.74e4
  • 1.74e4
  • 1.87e4
  • 1.95e4
41.65
  • 41.65
  • 37.34
  • 34.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.81e4
  • 1.81e4
  • 2.14e4
  • 2.24e4
  • 2.42e4
  • 2.77e4
39.27
  • 39.27
  • 28.45
  • 25.04
  • 18.95
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.75
  • 26.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
23.15
  • 23.15
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.68
  • 22.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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