D. rerio Gene: epcam - ENSDARG00000040534 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040534
Nameepcam
Descriptionepithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
OrganismDanio rerio (zebrafish)
Synonym(s)pan-epithelial glycoprotein, sb:cb6, tacstd, wu:fj17g02, zgc:110304, zgc:77119

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
16.0
  • 16.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
17.0
  • 17.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
29.1
  • 29.1
  • 29.1
  • 31.5
  • 76.5
  • 198
99.91
  • 99.91
  • 99.91
  • 99.90
  • 99.75
  • 99.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
34.5
  • 34.5
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:00072334 cell stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
  • ZFS:0000049segmentation
90.4
  • 90.4
  • 383
  • 628
  • 628
  • 849
  • 899
  • 971
  • 998
  • 1.08e3
  • 1.14e3
  • 1.31e3
  • 1.50e3
  • 1.50e3
  • 2.66e3
  • 5.29e3
  • 6.79e3
  • 9.91e3
  • 1.44e4
  • 1.49e4
  • 1.49e4
99.70
  • 99.70
  • 98.72
  • 97.90
  • 97.90
  • 97.16
  • 96.99
  • 96.75
  • 96.66
  • 96.37
  • 96.18
  • 95.61
  • 94.99
  • 94.99
  • 91.10
  • 82.29
  • 77.27
  • 66.83
  • 51.88
  • 49.99
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
96.3
  • 96.3
  • 229
99.68
  • 99.68
  • 99.24
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
160
  • 160
  • 422
  • 551
  • 643
  • 696
  • 718
99.47
  • 99.47
  • 98.59
  • 98.16
  • 97.85
  • 97.67
  • 97.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
176
  • 176
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
184
  • 184
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
195
  • 195
99.35
  • 99.35
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
363
  • 363
  • 1.43e3
98.79
  • 98.79
  • 95.20
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
373
  • 373
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
461
  • 461
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
473
  • 473
  • 486
  • 527
  • 598
  • 618
  • 676
  • 683
  • 699
  • 875
  • 991
98.42
  • 98.42
  • 98.38
  • 98.24
  • 98.00
  • 97.93
  • 97.74
  • 97.72
  • 97.66
  • 97.07
  • 96.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
615
  • 615
  • 617
  • 891
97.94
  • 97.94
  • 97.94
  • 97.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
650
  • 650
  • 1.41e4
97.83
  • 97.83
  • 52.75
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
803
  • 803
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.42e3
  • 1.42e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.17
  • 95.17
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e3
  • 1.60e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.78e3
  • 1.78e3
94.05
  • 94.05
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.08e3
  • 2.08e3
93.02
  • 93.02
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
92.17
  • 92.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.76
  • 91.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.56
  • 91.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.25
  • 91.25
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
  • 1.15e4
  • 1.23e4
89.46
  • 89.46
  • 61.51
  • 58.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005421pectoral appendage apical ectodermal ridge
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
3.32e3
  • 3.32e3
  • 4.48e3
  • 9.51e3
  • 9.51e3
88.89
  • 88.89
  • 85.00
  • 68.17
  • 68.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.34e3
  • 3.34e3
  • 9.49e3
88.81
  • 88.81
  • 68.22
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.72e3
  • 3.72e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
4.60e3
  • 4.60e3
  • 4.60e3
  • 8.22e3
  • 8.30e3
84.61
  • 84.61
  • 84.61
  • 72.48
  • 72.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
  • 5.34e3
  • 5.98e3
  • 6.89e3
  • 7.47e3
  • 8.40e3
  • 8.54e3
  • 1.47e4
84.61
  • 84.61
  • 82.14
  • 79.99
  • 76.92
  • 74.99
  • 71.86
  • 71.42
  • 50.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.23e3
  • 5.23e3
  • 5.43e3
  • 8.22e3
  • 8.47e3
  • 8.65e3
  • 9.10e3
  • 9.25e3
82.49
  • 82.49
  • 81.81
  • 72.48
  • 71.64
  • 71.04
  • 69.55
  • 69.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
5.27e3
  • 5.27e3
  • 5.60e3
  • 7.12e3
  • 7.91e3
  • 8.22e3
  • 8.22e3
  • 8.79e3
82.35
  • 82.35
  • 81.24
  • 76.18
  • 73.52
  • 72.48
  • 72.48
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
5.34e3
  • 5.34e3
  • 5.34e3
  • 6.22e3
  • 6.22e3
  • 7.47e3
  • 8.30e3
  • 8.30e3
82.14
  • 82.14
  • 82.14
  • 79.16
  • 79.16
  • 74.99
  • 72.21
  • 72.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
6.15e3
  • 6.15e3
  • 6.15e3
  • 8.40e3
  • 8.79e3
79.40
  • 79.40
  • 79.40
  • 71.86
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
6.22e3
  • 6.22e3
  • 6.79e3
  • 7.97e3
  • 8.04e3
79.16
  • 79.16
  • 77.27
  • 73.32
  • 73.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
6.29e3
  • 6.29e3
  • 6.29e3
78.94
  • 78.94
  • 78.94
AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
6.72e3
  • 6.72e3
  • 7.47e3
  • 8.30e3
  • 8.40e3
77.49
  • 77.49
  • 74.99
  • 72.21
  • 71.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
7.03e3
  • 7.03e3
  • 7.97e3
  • 7.97e3
  • 8.40e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
76.46
  • 76.46
  • 73.32
  • 73.32
  • 71.86
  • 69.99
  • 69.99
  • 69.43
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001316anterior lateral line placode
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2005316fin fold pectoral fin bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.71e3
  • 8.71e3
  • 9.51e3
70.82
  • 70.82
  • 68.17
AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
9.44e3
  • 9.44e3
  • 1.37e4
68.40
  • 68.40
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000023Segmentation:1-4 somites
9.51e3
  • 9.51e3
  • 9.51e3
  • 1.05e4
  • 1.05e4
  • 1.24e4
  • 1.34e4
  • 1.49e4
68.17
  • 68.17
  • 68.17
  • 64.99
  • 64.99
  • 58.32
  • 54.99
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
9.60e3
  • 9.60e3
  • 9.96e3
  • 1.31e4
67.85
  • 67.85
  • 66.66
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:2001157posterior lateral line primordium
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.24e4
66.67
  • 66.67
  • 62.50
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.66
  • 61.66
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.18e4
  • 1.18e4
  • 1.28e4
60.48
  • 60.48
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.32e4
  • 1.32e4
  • 1.34e4
55.86
  • 55.86
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
CL:0000852neuromast support cell
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001468anterior lateral line system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2005117anterior lateral line primordium
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001314posterior lateral line ganglion
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001431primitive olfactory epithelium
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCU570977
EnsemblENSDARG00000040534 (epcam)
Uniprot/SPTREMBLB8JM11, B8JM11_DANRE
ZFINZDB-GENE-040426-2209 (epcam)

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