D. rerio Gene: hnrnpul1 - ENSDARG00000040564 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040564
Namehnrnpul1
Descriptionheterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
OrganismDanio rerio (zebrafish)
Synonym(s)hnrpul1, wu:fb53d10, wu:fk45c03, zgc:85971

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
585
  • 585
  • 608
  • 612
  • 625
  • 647
  • 976
  • 1.17e3
  • 1.48e3
  • 1.73e3
  • 2.00e3
  • 2.80e3
  • 2.99e3
  • 3.04e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.21e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.39e4
  • 1.41e4
  • 1.45e4
  • 1.45e4
98.04
  • 98.04
  • 97.97
  • 97.95
  • 97.91
  • 97.84
  • 96.73
  • 96.10
  • 95.06
  • 94.20
  • 93.29
  • 90.61
  • 89.98
  • 89.81
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 75.86
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 53.44
  • 52.86
  • 51.56
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
635
  • 635
  • 989
  • 1.05e3
  • 1.24e3
  • 1.65e3
  • 1.69e3
97.88
  • 97.88
  • 96.69
  • 96.48
  • 95.85
  • 94.47
  • 94.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
817
  • 817
  • 1.02e3
  • 1.07e3
  • 1.18e3
  • 1.22e3
  • 1.63e3
  • 1.66e3
  • 1.67e3
  • 1.80e3
  • 2.68e3
97.27
  • 97.27
  • 96.59
  • 96.44
  • 96.06
  • 95.91
  • 94.55
  • 94.45
  • 94.40
  • 93.96
  • 91.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
971
  • 971
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
971
  • 971
  • 1.16e3
  • 4.51e3
  • 5.75e3
96.75
  • 96.75
  • 96.14
  • 84.90
  • 80.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.06e3
  • 1.06e3
96.45
  • 96.45
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.28e3
  • 1.28e3
95.72
  • 95.72
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
  • 3.18e3
94.01
  • 94.01
  • 89.35
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.24
  • 93.24
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
  • 6.01e3
92.74
  • 92.74
  • 79.88
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.57e3
  • 2.57e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
2.80e3
  • 2.80e3
  • 2.95e3
  • 3.55e3
90.63
  • 90.63
  • 90.12
  • 88.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.32e3
  • 3.32e3
  • 5.09e3
88.89
  • 88.89
  • 82.97
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.64
  • 88.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.45
  • 88.45
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.15
  • 88.15
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.87e3
  • 3.87e3
  • 5.03e3
87.03
  • 87.03
  • 83.15
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.51
  • 86.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.11
  • 86.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.35e3
  • 4.35e3
  • 5.15e3
  • 9.50e3
  • 1.05e4
  • 1.12e4
85.44
  • 85.44
  • 82.77
  • 68.18
  • 64.79
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.54
  • 84.54
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.69
  • 83.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.26
  • 82.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.38e3
  • 5.38e3
81.97
  • 81.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.40
  • 81.40
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.20
  • 80.20
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.30e3
  • 8.30e3
72.22
  • 72.22
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.68
  • 61.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR377223
EnsemblENSDARG00000040564 (hnrnpul1)
Uniprot/SPTREMBLQ1L9A1, Q1L9A1_DANRE
ZFINZDB-GENE-040426-2432 (hnrnpul1)

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