D. rerio Gene: lrrc32 - ENSDARG00000040621 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040621
Namelrrc32
Descriptionleucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-211p17.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.10
  • 87.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.71
  • 77.71
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.23
  • 76.23
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
  • 1.43e4
71.78
  • 71.78
  • 52.22
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.84
  • 53.84
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.06
  • 44.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.76
  • 42.76
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.60
  • 42.60
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.35
  • 41.35
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.88
  • 38.88
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.21
  • 38.21
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.07
  • 37.07
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.90e4
  • 1.90e4
  • 1.91e4
  • 1.91e4
  • 2.03e4
  • 2.09e4
36.51
  • 36.51
  • 36.18
  • 36.00
  • 31.87
  • 30.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.98e4
  • 1.98e4
  • 2.04e4
33.59
  • 33.59
  • 31.64
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.27
  • 31.27
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.27
  • 30.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.23
  • 30.23
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.04
  • 30.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU469093
EnsemblENSDARG00000040621 (lrrc32)
Uniprot/SPTREMBLE7FFN8, E7FFN8_DANRE
ZFINZDB-GENE-090630-1 (lrrc32)

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