D. rerio Gene: zgc:110333 - ENSDARG00000040628 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040628
Namezgc:110333
Descriptionzgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
OrganismDanio rerio (zebrafish)
Synonym(s)sb:cb574

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.23
  • 96.23
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
  • 2.21e3
95.57
  • 95.57
  • 92.60
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
2.26e3
  • 2.26e3
  • 3.28e3
  • 3.35e3
  • 3.48e3
  • 4.48e3
  • 4.57e3
92.42
  • 92.42
  • 89.03
  • 88.79
  • 88.35
  • 84.99
  • 84.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.17
  • 91.17
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000109gastrula stage
4.06e3
  • 4.06e3
  • 5.12e3
  • 5.24e3
  • 5.70e3
  • 7.04e3
  • 8.08e3
  • 1.02e4
  • 1.11e4
  • 1.12e4
  • 1.13e4
  • 1.15e4
  • 1.23e4
  • 1.32e4
  • 1.34e4
  • 1.38e4
  • 1.47e4
  • 1.49e4
86.41
  • 86.41
  • 82.85
  • 82.46
  • 80.90
  • 76.43
  • 72.95
  • 65.98
  • 62.97
  • 62.59
  • 62.09
  • 61.58
  • 58.74
  • 55.92
  • 55.25
  • 53.84
  • 50.90
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.27e3
  • 5.27e3
  • 5.32e3
  • 5.58e3
  • 5.86e3
  • 5.96e3
  • 6.74e3
  • 6.92e3
  • 7.38e3
  • 9.14e3
  • 1.03e4
82.37
  • 82.37
  • 82.18
  • 81.31
  • 80.37
  • 80.04
  • 77.42
  • 76.84
  • 75.28
  • 69.38
  • 65.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.30e3
  • 5.30e3
  • 6.01e3
  • 9.11e3
82.25
  • 82.25
  • 79.89
  • 69.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
  • 1.49e4
  • 2.08e4
77.77
  • 77.77
  • 49.94
  • 30.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.49e3
  • 7.49e3
  • 1.42e4
74.92
  • 74.92
  • 52.41
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
7.70e3
  • 7.70e3
  • 7.75e3
  • 1.46e4
74.21
  • 74.21
  • 74.04
  • 50.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.14e4
  • 1.14e4
61.81
  • 61.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.07
  • 61.07
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.20e4
  • 1.20e4
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
  • 1.92e4
53.62
  • 53.62
  • 35.80
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.43e4
  • 1.43e4
52.16
  • 52.16
AEIR
  • AEIR
UBERON:0001555digestive tract
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.90
  • 49.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.74
  • 41.74
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.08
  • 40.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.75
  • 22.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000040628 (zgc:110333)
ZFINZDB-GENE-050417-331 (zgc:110333)
EMBLBC092882, BC129277, BC164249, CABZ01009449, CABZ01009450, CABZ01009451
Uniprot/SPTREMBLQ568F1, Q568F1_DANRE

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