D. rerio Gene: wipi1 - ENSDARG00000040657 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040657
Namewipi1
DescriptionWD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:64205

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.71e3
  • 1.71e3
  • 2.81e3
  • 9.19e3
  • 1.16e4
94.26
  • 94.26
  • 90.59
  • 69.24
  • 61.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
  • 5.17e3
89.10
  • 89.10
  • 82.68
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.67
  • 87.67
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
  • 7.82e3
87.53
  • 87.53
  • 73.83
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.08e3
  • 4.08e3
  • 6.99e3
86.33
  • 86.33
  • 76.60
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
4.51e3
  • 4.51e3
  • 4.57e3
  • 4.68e3
  • 4.77e3
  • 5.51e3
  • 6.45e3
  • 6.82e3
  • 8.24e3
  • 9.46e3
  • 9.55e3
84.89
  • 84.89
  • 84.71
  • 84.32
  • 84.03
  • 81.56
  • 78.40
  • 77.17
  • 72.42
  • 68.34
  • 68.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
  • 7.34e3
  • 7.78e3
  • 7.80e3
  • 7.81e3
  • 9.69e3
  • 9.70e3
  • 1.01e4
  • 1.09e4
  • 1.17e4
  • 1.18e4
  • 1.28e4
  • 1.31e4
  • 1.38e4
  • 1.38e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
84.51
  • 84.51
  • 75.41
  • 73.95
  • 73.88
  • 73.84
  • 67.56
  • 67.52
  • 66.05
  • 63.49
  • 60.86
  • 60.60
  • 57.23
  • 56.18
  • 53.85
  • 53.84
  • 49.95
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
83.97
  • 83.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.31
  • 82.31
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.78
  • 81.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.57e3
  • 6.57e3
  • 6.61e3
  • 7.13e3
78.00
  • 78.00
  • 77.86
  • 76.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.42
  • 77.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
76.33
  • 76.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.83
  • 74.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.45
  • 73.45
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.29e3
  • 8.29e3
72.24
  • 72.24
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
9.17e3
  • 9.17e3
  • 1.07e4
  • 1.23e4
  • 1.24e4
  • 1.24e4
  • 1.26e4
69.30
  • 69.30
  • 64.16
  • 58.85
  • 58.48
  • 58.42
  • 57.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.01e4
  • 1.01e4
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.01e4
  • 1.01e4
66.04
  • 66.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.07
  • 62.07
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
61.88
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.16e4
  • 1.16e4
  • 1.21e4
  • 1.28e4
  • 1.29e4
  • 1.31e4
61.11
  • 61.11
  • 59.49
  • 57.00
  • 56.80
  • 56.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.25e4
  • 1.25e4
58.27
  • 58.27
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.26e4
  • 1.26e4
  • 1.28e4
  • 1.34e4
  • 1.39e4
  • 1.39e4
  • 1.41e4
  • 1.41e4
57.68
  • 57.68
  • 57.13
  • 55.24
  • 53.55
  • 53.31
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.28e4
  • 1.28e4
57.20
  • 57.20
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
55.97
  • 55.97
  • 54.97
  • 54.52
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000026Segmentation:14-19 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX897685, CU855789
EnsemblENSDARG00000040657 (wipi1)
Uniprot/SPTREMBLB0S7L1, B0S7L1_DANRE
ZFINZDB-GENE-040426-1404 (wipi1)

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