D. rerio Gene: lrtomt - ENSDARG00000040668 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040668
Namelrtomt
Descriptionleucine rich transmembrane and O-methyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-962]
OrganismDanio rerio (zebrafish)
Synonym(s)lrrp51, zgc:153736

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.00e3
  • 3.00e3
89.95
  • 89.95
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.62
  • 65.62
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.77
  • 61.77
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.40e4
  • 1.40e4
  • 1.66e4
52.98
  • 52.98
  • 44.36
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.44e4
  • 1.44e4
  • 1.74e4
51.83
  • 51.83
  • 41.64
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.49e4
  • 1.49e4
49.96
  • 49.96
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.58e4
  • 1.58e4
47.24
  • 47.24
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.20
  • 46.20
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.62e4
  • 1.62e4
  • 1.84e4
  • 2.02e4
  • 2.22e4
  • 2.77e4
45.62
  • 45.62
  • 38.42
  • 32.53
  • 25.61
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
  • 2.36e4
43.53
  • 43.53
  • 21.06
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.85
  • 41.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.09
  • 40.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.16
  • 38.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.90
  • 37.90
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.31
  • 37.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.15
  • 37.15
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.49
  • 35.49
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.79
  • 26.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCU655961
EnsemblENSDARG00000040668 (lrtomt)
Uniprot/SPTREMBLF1QQN4, F1QQN4_DANRE
ZFINZDB-GENE-060929-962 (lrtomt)

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