D. rerio Gene: zgc:153846 - ENSDARG00000040738 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040738
Namezgc:153846
Descriptionzgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
OrganismDanio rerio (zebrafish)
Synonym(s)crygm1b, crystallin gamma m1b
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
314
  • 314
  • 355
  • 1.19e3
  • 1.69e3
  • 2.55e3
  • 1.10e4
  • 1.50e4
  • 1.50e4
  • 1.53e4
  • 1.54e4
  • 1.55e4
98.95
  • 98.95
  • 98.81
  • 96.00
  • 94.34
  • 91.48
  • 63.10
  • 49.92
  • 49.81
  • 48.75
  • 48.29
  • 48.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.14e3
  • 1.14e3
  • 5.60e3
  • 1.00e4
96.19
  • 96.19
  • 81.24
  • 66.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.58e3
  • 1.58e3
  • 6.24e3
  • 1.17e4
  • 1.58e4
  • 1.98e4
  • 2.57e4
  • 2.77e4
  • 2.87e4
94.72
  • 94.72
  • 79.10
  • 60.76
  • 46.94
  • 33.62
  • 13.80
  • 7.41
  • 3.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.51e3
  • 2.51e3
  • 9.45e3
91.61
  • 91.61
  • 68.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
  • 2.64e4
74.65
  • 74.65
  • 11.49
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.80e3
  • 9.80e3
  • 1.28e4
67.20
  • 67.20
  • 57.17
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.43e4
  • 1.43e4
52.09
  • 52.09
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.52e4
  • 1.52e4
  • 1.58e4
48.94
  • 48.94
  • 46.97
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000040738.

Cross-references

EnsemblENSDARG00000040738 (zgc:153846)
ZFINZDB-GENE-060929-898 (zgc:153846)
EMBLBC122429, CR391987
Uniprot/SPTREMBLQ0D276, Q0D276_DANRE

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