Gene: si:dkey-27n14.1 - ENSDARG00000040816 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000040816
Name	si:dkey-27n14.1
Description	si:dkey-27n14.1 [Source:ZFIN;Acc:ZDB-GENE-100922-123]
Organism	Danio rerio (zebrafish)
Paralog(s)	3 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	1.41e4 1.41e4 1.57e4 1.81e4 2.02e4 2.12e4	52.70 52.70 47.37 39.37 32.33 28.91	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.47e4 1.47e4	50.74 50.74	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.75e4 1.75e4 1.95e4	41.46 41.46 34.57	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.83e4 1.83e4	38.56 38.56	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.97e4 1.97e4	33.91 33.91	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.06e4 2.06e4	30.92 30.92	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	2 genes ENSDARG00000009624 UTS2R ENSDARG00000096870 si:dkey-33c3.1	Compare expression	[+]
Deuterostomia	3 genes ENSDARG00000009624 UTS2R ENSDARG00000096322 si:ch73-379f7.4 ENSDARG00000096870 si:dkey-33c3.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000040816.

Cross-references

Ensembl	ENSDARG00000040816 (si:dkey-27n14.1)
ZFIN	ZDB-GENE-100922-123 (si:dkey-27n14.1)
EMBL	BX322544
Uniprot/SPTREMBL	E7FG00, E7FG00_DANRE, F1QSR0, F1QSR0_DANRE