D. rerio Gene: mid1ip1a - ENSDARG00000041051 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041051
Namemid1ip1a
DescriptionMID1 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-990415-81]
OrganismDanio rerio (zebrafish)
Synonym(s)etid309730.9, g12, wu:fj32f05
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
147
  • 147
  • 291
  • 9.97e3
  • 1.00e4
  • 1.11e4
99.51
  • 99.51
  • 99.03
  • 66.61
  • 66.37
  • 62.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
164
  • 164
  • 168
  • 180
  • 222
  • 397
  • 2.74e3
99.46
  • 99.46
  • 99.44
  • 99.40
  • 99.26
  • 98.68
  • 90.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000015Blastula:Dome
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
251
  • 251
  • 528
  • 668
  • 1.19e3
  • 1.87e3
  • 2.29e3
  • 2.71e3
  • 2.83e3
  • 2.91e3
  • 3.26e3
  • 3.48e3
  • 3.64e3
  • 6.46e3
  • 7.47e3
  • 7.65e3
  • 1.15e4
  • 1.36e4
  • 1.49e4
  • 1.50e4
99.16
  • 99.16
  • 98.24
  • 97.77
  • 96.01
  • 93.76
  • 92.35
  • 90.94
  • 90.53
  • 90.27
  • 89.09
  • 88.36
  • 87.80
  • 78.38
  • 74.99
  • 74.38
  • 61.54
  • 54.61
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
281
  • 281
  • 314
99.06
  • 99.06
  • 98.95
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
612
  • 612
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.05e3
  • 1.05e3
  • 5.21e3
96.48
  • 96.48
  • 82.54
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.97e3
  • 1.97e3
  • 3.13e3
  • 3.73e3
93.41
  • 93.41
  • 89.53
  • 87.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.22
  • 93.22
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
2.11e3
  • 2.11e3
  • 2.12e3
  • 2.15e3
  • 2.28e3
  • 2.42e3
  • 2.50e3
  • 2.59e3
  • 2.73e3
  • 2.74e3
  • 3.10e3
92.92
  • 92.92
  • 92.91
  • 92.80
  • 92.37
  • 91.90
  • 91.65
  • 91.32
  • 90.86
  • 90.82
  • 89.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
  • 1.34e4
  • 1.45e4
89.87
  • 89.87
  • 54.99
  • 51.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.23e3
  • 4.23e3
85.85
  • 85.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.67e3
  • 4.67e3
84.37
  • 84.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.82e3
  • 4.82e3
83.88
  • 83.88
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.21e3
  • 5.21e3
82.56
  • 82.56
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.19e3
  • 7.19e3
75.92
  • 75.92
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.89e3
  • 8.89e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
  • 1.59e4
69.47
  • 69.47
  • 46.80
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.62
  • 61.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.59
  • 58.59
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
57.73
  • 57.73
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.94
  • 50.94
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.48
  • 45.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.87
  • 43.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.90
  • 38.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000041051.

Cross-references

EnsemblENSDARG00000041051 (mid1ip1a)
ZFINZDB-GENE-990415-81 (mid1ip1a)
EMBLBC074084, BC164900, BX571713, U27121
Uniprot/SPTREMBLB2GQW8, B2GQW8_DANRE
Uniprot/SWISSPROTM1I1A_DANRE, P47805

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