D. rerio Gene: got2a - ENSDARG00000041068 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041068
Namegot2a
Descriptionglutamic-oxaloacetic transaminase 2a, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2703]
OrganismDanio rerio (zebrafish)
Synonym(s)got2, zgc:66329
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
281
  • 281
  • 1.04e3
99.06
  • 99.06
  • 96.51
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
386
  • 386
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
428
  • 428
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
478
  • 478
98.40
  • 98.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
714
  • 714
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
757
  • 757
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
770
  • 770
97.42
  • 97.42
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
932
  • 932
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
1.53e3
  • 1.53e3
  • 9.12e3
  • 9.93e3
  • 1.02e4
  • 1.03e4
  • 1.04e4
  • 1.28e4
  • 1.57e4
94.86
  • 94.86
  • 69.45
  • 66.76
  • 65.94
  • 65.62
  • 65.15
  • 57.06
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.67e3
  • 1.67e3
  • 2.64e3
94.41
  • 94.41
  • 91.17
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.71e3
  • 1.71e3
  • 3.49e3
  • 8.31e3
  • 8.74e3
94.26
  • 94.26
  • 88.32
  • 72.18
  • 70.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
1.81e3
  • 1.81e3
  • 1.85e3
  • 2.12e3
  • 2.49e3
  • 3.44e3
  • 8.69e3
  • 1.06e4
  • 1.13e4
  • 1.19e4
  • 1.21e4
  • 1.23e4
  • 1.23e4
  • 1.24e4
  • 1.27e4
93.95
  • 93.95
  • 93.79
  • 92.90
  • 91.68
  • 88.49
  • 70.89
  • 64.42
  • 62.03
  • 60.03
  • 59.55
  • 58.87
  • 58.81
  • 58.44
  • 57.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
93.85
  • 93.85
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.89e3
  • 1.89e3
  • 3.07e3
  • 6.74e3
93.69
  • 93.69
  • 89.73
  • 77.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.29e3
  • 2.29e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
2.47e3
  • 2.47e3
  • 2.53e3
  • 3.43e3
  • 5.09e3
  • 9.86e3
91.73
  • 91.73
  • 91.53
  • 88.50
  • 82.95
  • 66.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.63e3
  • 2.63e3
  • 1.20e4
91.21
  • 91.21
  • 59.96
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.40
  • 90.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.00e3
  • 3.00e3
89.95
  • 89.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.63
  • 88.63
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.68e3
  • 4.68e3
  • 7.53e3
84.32
  • 84.32
  • 74.79
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.62e3
  • 5.62e3
81.19
  • 81.19
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
7.90e3
  • 7.90e3
  • 1.21e4
  • 1.28e4
  • 1.28e4
  • 1.29e4
  • 1.35e4
73.53
  • 73.53
  • 59.62
  • 57.15
  • 57.06
  • 56.69
  • 54.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.81
  • 72.81
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.38
  • 62.38
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.16e4
  • 1.16e4
61.00
  • 61.00
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria23 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000041068.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000041068.

Cross-references

EnsemblENSDARG00000041068 (got2a)
ZFINZDB-GENE-040426-2703 (got2a)
EMBLBC054684, BC165803, BX571884
Uniprot/SPTREMBLQ7SYK7, Q7SYK7_DANRE

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