D. rerio Gene: wnt2 - ENSDARG00000041117 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041117
Namewnt2
Descriptionwingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
OrganismDanio rerio (zebrafish)
Synonym(s)etid309852.18, wnt-2, zfwnt2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006859swim bladder bud
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
3.73e3
  • 3.73e3
  • 4.98e3
87.50
  • 87.50
  • 83.33
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
6.54e3
  • 6.54e3
  • 6.64e3
  • 7.03e3
  • 7.91e3
  • 1.54e4
  • 1.57e4
  • 1.61e4
  • 1.61e4
  • 1.62e4
  • 1.62e4
  • 1.65e4
  • 1.67e4
  • 1.69e4
  • 1.69e4
  • 1.70e4
  • 1.72e4
  • 1.73e4
78.12
  • 78.12
  • 77.77
  • 76.46
  • 73.52
  • 48.42
  • 47.49
  • 46.15
  • 46.10
  • 45.89
  • 45.72
  • 44.84
  • 44.18
  • 43.34
  • 43.33
  • 42.98
  • 42.38
  • 42.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 1.23e4
  • 1.23e4
  • 1.23e4
74.99
  • 74.99
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.65e3
  • 8.65e3
  • 8.96e3
71.04
  • 71.04
  • 69.98
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
  • 1.30e4
  • 1.39e4
  • 1.55e4
  • 2.36e4
69.98
  • 69.98
  • 56.49
  • 53.32
  • 48.06
  • 20.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.42e3
  • 9.42e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.17e4
  • 1.17e4
  • 1.27e4
  • 1.27e4
60.84
  • 60.84
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.17e4
  • 1.17e4
  • 1.27e4
  • 1.27e4
60.68
  • 60.68
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
  • 1.27e4
  • 1.29e4
57.47
  • 57.47
  • 57.47
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
  • 1.52e4
  • 1.54e4
  • 1.56e4
  • 1.71e4
  • 1.72e4
  • 1.78e4
53.54
  • 53.54
  • 48.95
  • 48.43
  • 47.68
  • 42.58
  • 42.50
  • 40.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 1.87e4
50.55
  • 50.55
  • 37.32
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.55e4
  • 1.55e4
50.01
  • 50.01
  • 48.25
  • 48.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.80e4
49.92
  • 49.92
  • 39.75
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.87
  • 47.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.30
  • 44.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.60
  • 42.60
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.41
  • 42.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.78e4
  • 1.78e4
40.47
  • 40.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.57
  • 39.57
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.21
  • 25.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC056277, U51266
EnsemblENSDARG00000041117 (wnt2)
Uniprot/SWISSPROTQ92048, WNT2_DANRE
ZFINZDB-GENE-980526-416 (wnt2)

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