D. rerio Gene: crygm5 - ENSDARG00000041179 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041179
Namecrygm5
Descriptioncrystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103622
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.17e3
  • 1.17e3
  • 3.82e3
96.10
  • 96.10
  • 87.23
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
4.12e3
  • 4.12e3
  • 1.48e4
  • 2.02e4
86.22
  • 86.22
  • 50.44
  • 32.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.16e3
  • 7.16e3
  • 2.18e4
76.01
  • 76.01
  • 26.93
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
9.44e3
  • 9.44e3
  • 1.08e4
68.38
  • 68.38
  • 63.74
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.16
  • 26.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000041179.

Cross-references

EnsemblENSDARG00000041179 (crygm5)
ZFINZDB-GENE-041024-6 (crygm5)
EMBLAY738754, BC083443, BC164872, BX545855
Uniprot/SPTREMBLQ5XJ63, Q5XJ63_DANRE

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