Gene: si:dkey-241l7.6 - ENSDARG00000041248 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000041248
Name	si:dkey-241l7.6
Description	si:dkey-241l7.6 [Source:ZFIN;Acc:ZDB-GENE-041014-235]
Organism	Danio rerio (zebrafish)
Paralog(s)	12 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	3.00 3.00	99.99 99.99	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	113 113	99.63 99.63	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	233 233	99.22 99.22	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	283 283	99.06 99.06	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	399 399	98.67 98.67	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	548 548	98.17 98.17	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.11e3 1.11e3	96.30 96.30	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	3.52e3 3.52e3	88.20 88.20	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	5.55e3 5.55e3	81.41 81.41	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	6.19e3 6.19e3 1.59e4	79.26 79.26 46.90	AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	7.33e3 7.33e3	75.46 75.46	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.87e3 7.87e3	73.64 73.64	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	8.55e3 8.55e3	71.39 71.39	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	9.49e3 9.49e3	68.21 68.21	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	1.09e4 1.09e4 1.10e4	63.34 63.34 63.09	AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.85 60.85	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	1.32e4 1.32e4 2.01e4 2.39e4 2.42e4 2.54e4	55.66 55.66 32.63 19.84 19.10 14.85	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.97e4 1.97e4	34.10 34.10	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	2.13e4 2.13e4	28.67 28.67	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.20e4 2.20e4	26.37 26.37	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	2.21e4 2.21e4	26.09 26.09	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.55e4 2.55e4	14.63 14.63	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	11 genes ENSDARG00000025783 si:ch211-125e6.11 ENSDARG00000038321 zgc:172053 ENSDARG00000055833 si:dkey-216e24.3 ENSDARG00000069381 si:ch211-125e6.5 ENSDARG00000086956 si:dkey-241l7.3 ENSDARG00000088989 si:dkey-241l7.5 ENSDARG00000089478 zgc:171670 ENSDARG00000092090 si:ch211-125e6.12 ENSDARG00000094183 si:ch211-125e6.14 ENSDARG00000094370 si:ch211-125e6.13 ENSDARG00000105335 si:dkey-241l7.2	Compare expression	[+]
Clupeocephala	12 genes ENSDARG00000025783 si:ch211-125e6.11 ENSDARG00000038321 zgc:172053 ENSDARG00000055833 si:dkey-216e24.3 ENSDARG00000069381 si:ch211-125e6.5 ENSDARG00000079043 si:dkeyp-75b4.10 ENSDARG00000086956 si:dkey-241l7.3 ENSDARG00000088989 si:dkey-241l7.5 ENSDARG00000089478 zgc:171670 ENSDARG00000092090 si:ch211-125e6.12 ENSDARG00000094183 si:ch211-125e6.14 ENSDARG00000094370 si:ch211-125e6.13 ENSDARG00000105335 si:dkey-241l7.2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000041248.

Cross-references

Ensembl	ENSDARG00000041248 (si:dkey-241l7.6)
ZFIN	ZDB-GENE-041014-235 (si:dkey-241l7.6)
EMBL	CR381646
Uniprot/SPTREMBL	Q5RG14, Q5RG14_DANRE, X1WFN2, X1WFN2_DANRE