D. rerio Gene: smtnl1 - ENSDARG00000041257 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041257
Namesmtnl1
Descriptionsmoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc59a04, zgc:113342, zgc:136661

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
  • 1.36e3
96.12
  • 96.12
  • 95.45
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.37
  • 94.37
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.87e3
  • 2.87e3
  • 1.74e4
90.39
  • 90.39
  • 41.57
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.14
  • 90.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.95e3
  • 2.95e3
  • 4.31e3
  • 5.35e3
  • 9.64e3
  • 1.54e4
90.13
  • 90.13
  • 85.57
  • 82.08
  • 67.72
  • 48.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.08
  • 82.08
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.58e3
  • 7.58e3
74.62
  • 74.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.13e3
  • 8.13e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.46e3
  • 9.46e3
68.31
  • 68.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.82
  • 61.82
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.77e4
60.39
  • 60.39
  • 40.62
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
  • 1.44e4
  • 1.49e4
56.38
  • 56.38
  • 51.82
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.09
  • 30.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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