D. rerio Gene: zgc:92380 - ENSDARG00000041339 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041339
Namezgc:92380
Descriptionzgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
OrganismDanio rerio (zebrafish)
Synonym(s)krtt1c9

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
662
  • 662
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.35
  • 96.35
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.59e3
  • 1.59e3
  • 1.63e3
94.68
  • 94.68
  • 94.54
AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.66e3
  • 1.66e3
  • 1.66e3
  • 4.27e3
  • 4.98e3
  • 4.98e3
  • 5.43e3
  • 6.89e3
  • 7.97e3
94.45
  • 94.45
  • 94.45
  • 85.71
  • 83.33
  • 83.33
  • 81.81
  • 76.92
  • 73.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.72e3
  • 1.72e3
  • 2.03e3
  • 2.27e3
  • 2.29e3
  • 2.50e3
94.25
  • 94.25
  • 93.19
  • 92.39
  • 92.33
  • 91.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.29e3
  • 2.29e3
  • 4.53e3
92.35
  • 92.35
  • 84.82
AEIR
  • AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
4.98e3
  • 4.98e3
  • 5.60e3
  • 6.64e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
83.33
  • 83.33
  • 81.25
  • 77.77
  • 77.77
  • 76.92
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 5.34e3
  • 5.60e3
  • 5.98e3
83.33
  • 83.33
  • 82.14
  • 81.24
  • 79.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.75e3
  • 5.75e3
  • 5.75e3
  • 5.98e3
  • 6.64e3
80.76
  • 80.76
  • 80.76
  • 79.99
  • 77.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
6.15e3
  • 6.15e3
  • 6.54e3
  • 6.72e3
  • 6.72e3
  • 7.12e3
79.40
  • 79.40
  • 78.12
  • 77.49
  • 77.49
  • 76.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000162cloaca
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.22e3
  • 6.22e3
  • 6.22e3
  • 6.22e3
  • 6.22e3
79.16
  • 79.16
  • 79.16
  • 79.16
  • 79.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.47e3
  • 6.47e3
78.34
  • 78.34
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
6.54e3
  • 6.54e3
  • 7.03e3
  • 7.03e3
  • 7.03e3
78.12
  • 78.12
  • 76.46
  • 76.46
  • 76.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000964cornea
  • ZFS:0000039Larval:Days 7-13
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
74.99
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.68
  • 74.68
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
8.50e3
  • 8.50e3
71.54
  • 71.54
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
  • 1.15e4
  • 1.98e4
71.51
  • 71.51
  • 61.51
  • 33.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.52
  • 63.52
AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.20e4
61.09
  • 61.09
  • 61.09
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.84
  • 53.84
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.04
  • 53.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.84
  • 51.84
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
50.97
  • 50.97
AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.86
  • 50.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.20
  • 50.20
AEIR
  • AEIR
UBERON:0001772corneal epithelium
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.06
  • 49.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.18
  • 43.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.81
  • 38.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.27
  • 35.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.83
  • 34.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.40
  • 33.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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