D. rerio Gene: zgc:161969 - ENSDARG00000041359 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041359
Namezgc:161969
Descriptionzgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
OrganismDanio rerio (zebrafish)
Synonym(s)fc12g06, wu:fb98h02, wu:fc12g06

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
1.58e3
  • 1.58e3
  • 3.01e3
  • 3.72e3
  • 4.44e3
  • 5.21e3
  • 5.45e3
94.72
  • 94.72
  • 89.94
  • 87.54
  • 85.12
  • 82.55
  • 81.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.65e3
  • 1.65e3
  • 4.73e3
  • 7.30e3
  • 1.13e4
  • 1.13e4
94.48
  • 94.48
  • 84.15
  • 75.57
  • 62.02
  • 62.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
  • 3.62e3
  • 4.51e3
  • 4.73e3
  • 5.93e3
  • 6.95e3
  • 8.41e3
  • 8.74e3
  • 9.91e3
  • 1.09e4
  • 1.11e4
  • 1.20e4
  • 1.23e4
  • 1.24e4
  • 1.45e4
  • 1.47e4
89.34
  • 89.34
  • 87.89
  • 84.90
  • 84.18
  • 80.16
  • 76.73
  • 71.85
  • 70.73
  • 66.81
  • 63.47
  • 62.72
  • 59.84
  • 58.95
  • 58.33
  • 51.42
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.93e3
  • 3.93e3
  • 4.80e3
  • 5.26e3
  • 6.11e3
  • 6.25e3
  • 7.59e3
  • 7.68e3
  • 8.42e3
  • 9.10e3
  • 1.34e4
86.83
  • 86.83
  • 83.93
  • 82.40
  • 79.54
  • 79.06
  • 74.57
  • 74.30
  • 71.82
  • 69.52
  • 55.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.17e3
  • 4.17e3
86.05
  • 86.05
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.88
  • 80.88
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
  • 9.26e3
78.40
  • 78.40
  • 68.99
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.81
  • 77.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.74e3
  • 6.74e3
77.42
  • 77.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.40
  • 77.40
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
  • 9.98e3
76.01
  • 76.01
  • 66.60
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.59e3
  • 7.59e3
  • 1.09e4
  • 1.18e4
74.58
  • 74.58
  • 63.46
  • 60.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.61e3
  • 7.61e3
  • 8.60e3
74.52
  • 74.52
  • 71.21
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.43
  • 72.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.45e3
  • 8.45e3
  • 9.43e3
  • 1.28e4
71.71
  • 71.71
  • 68.43
  • 57.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.63e3
  • 8.63e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.10
  • 70.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.94e3
  • 8.94e3
70.05
  • 70.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.40
  • 67.40
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.04e4
  • 1.04e4
65.17
  • 65.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.53
  • 64.53
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.08e4
  • 1.08e4
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.14e4
  • 1.14e4
61.85
  • 61.85
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
  • 1.31e4
58.48
  • 58.48
  • 56.19
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR854926, CU683898
EnsemblENSDARG00000041359 (zgc:161969)
Uniprot/SPTREMBLF1QIR2, F1QIR2_DANRE, F1RBD5, F1RBD5_DANRE
ZFINZDB-GENE-030131-2597 (zgc:161969)

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