D. rerio Gene: si:ch211-245j22.3 - ENSDARG00000041379 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041379
Namesi:ch211-245j22.3
Descriptionsi:ch211-245j22.3 [Source:ZFIN;Acc:ZDB-GENE-050419-38]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
  • 1.85e4
59.03
  • 59.03
  • 37.91
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.53e4
  • 1.53e4
48.90
  • 48.90
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
46.05
  • 46.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.63e4
  • 1.63e4
  • 1.74e4
45.26
  • 45.26
  • 41.57
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.70e4
  • 1.70e4
  • 1.92e4
43.18
  • 43.18
  • 35.61
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.80e4
  • 1.80e4
39.57
  • 39.57
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.00e4
  • 2.00e4
  • 2.10e4
  • 2.24e4
  • 2.24e4
  • 2.26e4
33.04
  • 33.04
  • 29.54
  • 25.06
  • 24.91
  • 24.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.65
  • 30.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.65
  • 30.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX928740
EnsemblENSDARG00000041379 (si:ch211-245j22.3)
Uniprot/SPTREMBLQ1LUM5, Q1LUM5_DANRE
ZFINZDB-GENE-050419-38 (si:ch211-245j22.3)

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