D. rerio Gene: rmdn3 - ENSDARG00000041407 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041407
Namermdn3
Descriptionregulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
OrganismDanio rerio (zebrafish)
Synonym(s)fam82a2, fam82c, fam82cgn, si:dkey-199i12.5, zrmd-1, zrmd-1gn
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.55
  • 87.55
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.48
  • 86.48
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
  • 6.87e3
84.79
  • 84.79
  • 76.99
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.60
  • 82.60
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
6.44e3
  • 6.44e3
  • 6.98e3
  • 1.15e4
  • 1.24e4
  • 1.26e4
78.44
  • 78.44
  • 76.65
  • 61.52
  • 58.53
  • 57.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.08
  • 78.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.78
  • 77.78
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.91e3
  • 6.91e3
  • 1.03e4
76.85
  • 76.85
  • 65.36
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.42e3
  • 7.42e3
75.17
  • 75.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.88e3
  • 7.88e3
73.61
  • 73.61
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.42e3
  • 8.42e3
71.79
  • 71.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.60e3
  • 8.60e3
  • 1.09e4
71.21
  • 71.21
  • 63.38
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.12e3
  • 9.12e3
  • 1.14e4
69.45
  • 69.45
  • 61.98
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.02
  • 66.02
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.85
  • 65.85
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.83
  • 65.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.73
  • 61.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.17e4
  • 1.17e4
  • 1.32e4
60.98
  • 60.98
  • 55.86
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.05
  • 60.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.96
  • 58.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000041407 (rmdn3)
ZFINZDB-GENE-041014-256 (rmdn3)
EMBLBR000698, BX936455
Uniprot/SPTREMBLQ5TYQ9, Q5TYQ9_DANRE, U3JB10, U3JB10_DANRE

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