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D. rerio Gene: uba52 - ENSDARG00000041435 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041435
Nameuba52
Descriptionubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa91f08, zgc:123344
Orthologs(s)24 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
15.0
  • 15.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
21.5
  • 21.5
  • 51.7
  • 52.6
  • 52.7
  • 58.1
  • 60.2
  • 73.3
  • 73.3
  • 89.3
  • 124
  • 149
  • 162
  • 333
  • 4.56e3
99.93
  • 99.93
  • 99.83
  • 99.83
  • 99.83
  • 99.81
  • 99.80
  • 99.76
  • 99.76
  • 99.70
  • 99.59
  • 99.51
  • 99.46
  • 98.89
  • 84.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
23.6
  • 23.6
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
28.0
  • 28.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
29.0
  • 29.0
99.91
  • 99.91
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
32.3
  • 32.3
  • 70.4
99.90
  • 99.90
  • 99.77
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
33.0
  • 33.0
99.89
  • 99.89
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
36.0
  • 36.0
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
37.0
  • 37.0
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
38.4
  • 38.4
  • 43.0
  • 44.5
  • 56.0
  • 67.5
  • 106
  • 110
  • 112
  • 121
  • 142
99.87
  • 99.87
  • 99.86
  • 99.85
  • 99.82
  • 99.78
  • 99.65
  • 99.64
  • 99.63
  • 99.60
  • 99.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
44.2
  • 44.2
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
50.3
  • 50.3
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
52.0
  • 52.0
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
53.8
  • 53.8
  • 55.3
  • 67.2
  • 139
99.82
  • 99.82
  • 99.82
  • 99.78
  • 99.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
54.0
  • 54.0
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
54.7
  • 54.7
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
55.0
  • 55.0
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
60.7
  • 60.7
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
61.9
  • 61.9
  • 100
99.80
  • 99.80
  • 99.67
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
75.9
  • 75.9
  • 1.95e3
99.75
  • 99.75
  • 93.46
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
80.3
  • 80.3
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
82.2
  • 82.2
  • 1.72e3
99.73
  • 99.73
  • 94.24
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
86.4
  • 86.4
  • 142
  • 143
99.71
  • 99.71
  • 99.53
  • 99.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
87.7
  • 87.7
  • 111
  • 131
  • 168
  • 177
  • 306
99.71
  • 99.71
  • 99.63
  • 99.56
  • 99.44
  • 99.41
  • 98.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
109
  • 109
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
295
  • 295
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
859
  • 859
  • 1.12e3
  • 3.25e3
  • 4.71e3
  • 5.42e3
97.13
  • 97.13
  • 96.26
  • 89.13
  • 84.23
  • 81.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
980
  • 980
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.29e3
  • 2.29e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.91
  • 84.91
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.38e3
  • 5.38e3
82.00
  • 82.00
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.10e3
  • 8.10e3
72.87
  • 72.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi14 species17 genesCompare expression
Bilateria21 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000041435.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000041435.

Cross-references

EnsemblENSDARG00000041435 (uba52)
ZFINZDB-GENE-051023-7 (uba52)
EMBLBC105746, BC107517, CU693374
Uniprot/SPTREMBLQ3B7P7, Q3B7P7_DANRE

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