Gene: MMADHC (1 to many) - ENSDARG00000041602 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000041602
Name	MMADHC (1 to many)
Description	zgc:92335 [Source:ZFIN;Acc:ZDB-GENE-040718-152]
Organism	Danio rerio (zebrafish)
Synonym(s)	c2orf25, cbld, cl25022
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	2.18e3 2.18e3	92.69 92.69	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	2.75e3 2.75e3	90.78 90.78	AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	2.97e3 2.97e3 1.44e4	90.04 90.04 51.84	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	3.33e3 3.33e3	88.86 88.86	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	3.53e3 3.53e3	88.19 88.19	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	3.75e3 3.75e3	87.44 87.44	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	3.82e3 3.82e3 4.65e3	87.22 87.22 84.44	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	4.11e3 4.11e3	86.23 86.23	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	4.20e3 4.20e3 7.17e3	85.92 85.92 75.98	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	4.47e3 4.47e3 7.65e3	85.03 85.03 74.40	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	4.53e3 4.53e3	84.83 84.83	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	4.61e3 4.61e3 1.49e4	84.55 84.55 49.94	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	4.65e3 4.65e3 5.89e3	84.45 84.45 80.28	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	5.00e3 5.00e3	83.27 83.27	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.28e3 5.28e3	82.32 82.32	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	5.28e3 5.28e3 5.99e3	82.32 82.32 79.93	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	5.32e3 5.32e3	82.17 82.17	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec	5.48e3 5.48e3 7.23e3 7.65e3 8.60e3 8.70e3	81.66 81.66 75.81 74.38 71.20 70.86	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	5.56e3 5.56e3	81.40 81.40	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	5.57e3 5.57e3	81.35 81.35	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	5.80e3 5.80e3	80.59 80.59	AEIR AEIR
UBERON:0000465	material anatomical entity	[+] 31 stages UBERON:00072322 cell stage UBERON:00072334 cell stage UBERON:00072368 cell stage ZFS:0000016Blastula:30%-epiboly ZFS:0000018Gastrula:Germ-ring UBERON:0000106zygote stage UBERON:0004707pharyngula stage ZFS:0000005Cleavage:16-cell ZFS:0000006Cleavage:32-cell ZFS:0000007Cleavage:64-cell ZFS:0000008Blastula:128-cell ZFS:0000009Blastula:256-cell ZFS:0000010Blastula:512-cell ZFS:0000011Blastula:1k-cell ZFS:0000012Blastula:High ZFS:0000013Blastula:Oblong ZFS:0000015Blastula:Dome ZFS:0000027Segmentation:20-25 somites ZFS:0000034Hatching:Pec-fin ZFS:0000022Gastrula:Bud ZFS:0000028Segmentation:26+ somites ZFS:0000017Gastrula:50%-epiboly ZFS:0000023Segmentation:1-4 somites ZFS:0000033Hatching:Long-pec ZFS:0000019Gastrula:Shield ZFS:0000020Gastrula:75%-epiboly ZFS:0000021Gastrula:90%-epiboly ZFS:0000025Segmentation:10-13 somites ZFS:0000024Segmentation:5-9 somites ZFS:0000014Blastula:Sphere ZFS:0000026Segmentation:14-19 somites	6.40e3 6.40e3 6.40e3 6.40e3 6.64e3 6.89e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.47e3 7.97e3 8.53e3 8.54e3 8.71e3 8.79e3 8.79e3 8.96e3 8.96e3 9.13e3 9.13e3 9.13e3 9.71e3 9.96e3 9.96e3	78.57 78.57 78.57 78.57 77.77 76.92 75.00 75.00 75.00 75.00 75.00 75.00 75.00 75.00 75.00 75.00 75.00 75.00 73.32 71.43 71.41 70.82 70.57 70.57 69.99 69.98 69.43 69.43 69.43 67.48 66.66 66.65	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	6.43e3 6.43e3	78.48 78.48	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	6.43e3 6.43e3	78.47 78.47	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	6.72e3 6.72e3	77.52 77.52	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	7.89e3 7.89e3	73.57 73.57	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Bilateria	1 gene ENSDARG00000005870 mmadhc	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000041602.

Cross-references

Ensembl	ENSDARG00000041602 (MMADHC (1 to many))
HGNC	HGNC:25221 (MMADHC (1 to many))
ZFIN	ZDB-GENE-040718-152 (zgc:92335)
EMBL	BC076018, CR847870
Uniprot/SPTREMBL	A5WUW7, A5WUW7_DANRE, A5WUW8, A5WUW8_DANRE, Q6DHF6, Q6DHF6_DANRE