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D. rerio Gene: bco2b - ENSDARG00000041715 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041715
Namebco2b
Descriptionbeta-carotene oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-060421-7448]
OrganismDanio rerio (zebrafish)
Synonym(s)bcdo2, bcdo2a, bco2a, bco2agn, wu:fk75b02, zgc:136769
Orthologs(s)21 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.48
  • 71.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.72
  • 59.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.58
  • 46.58
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.71
  • 42.71
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.26
  • 42.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.81e4
  • 1.81e4
  • 2.17e4
39.34
  • 39.34
  • 27.33
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.59
  • 34.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.00
  • 34.00
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
2.07e4
  • 2.07e4
  • 2.17e4
  • 2.21e4
  • 2.32e4
30.54
  • 30.54
  • 27.34
  • 25.99
  • 22.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.01
  • 25.01
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.28e4
  • 2.28e4
23.54
  • 23.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species19 genesCompare expression
Bilateria19 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000041715.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000041715 (bco2b)
ZFINZDB-GENE-060421-7448 (bco2b)
EMBLBC115259, BX572648
Uniprot/SPTREMBLQ1RLW1, Q1RLW1_DANRE

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