D. rerio Gene: arpc5la - ENSDARG00000041720 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041720
Namearpc5la
Descriptionactin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
OrganismDanio rerio (zebrafish)
Synonym(s)arpc5l, zgc:65881, zgc:77408

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.34e3
  • 2.34e3
  • 4.89e3
92.17
  • 92.17
  • 83.62
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.80e3
  • 2.80e3
90.63
  • 90.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.08e3
  • 3.08e3
89.70
  • 89.70
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
3.13e3
  • 3.13e3
  • 3.68e3
  • 4.57e3
  • 5.03e3
  • 5.23e3
89.52
  • 89.52
  • 87.69
  • 84.72
  • 83.15
  • 82.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.81
  • 88.81
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
  • 6.11e3
88.38
  • 88.38
  • 79.55
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.11e3
  • 4.11e3
  • 4.68e3
86.25
  • 86.25
  • 84.32
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
4.20e3
  • 4.20e3
  • 4.95e3
85.95
  • 85.95
  • 83.44
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.45e3
  • 4.45e3
85.09
  • 85.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.20
  • 84.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.17
  • 83.17
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.60e3
  • 5.60e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.91e3
  • 5.91e3
80.21
  • 80.21
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
5.98e3
  • 5.98e3
  • 6.22e3
  • 6.40e3
  • 6.89e3
  • 6.97e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.96e3
79.99
  • 79.99
  • 79.16
  • 78.56
  • 76.92
  • 76.66
  • 71.41
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.42
  • 78.42
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.58e3
  • 6.58e3
77.96
  • 77.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.60
  • 77.60
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.35
  • 77.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.16e3
  • 7.16e3
  • 7.91e3
76.03
  • 76.03
  • 73.50
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.46e3
  • 7.46e3
75.02
  • 75.02
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.59e3
  • 7.59e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.63
  • 69.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.52
  • 67.52
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.20e4
  • 1.22e4
  • 1.22e4
59.98
  • 59.98
  • 59.97
  • 59.06
  • 59.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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