D. rerio Gene: ccl38a.5 - ENSDARG00000041835 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041835
Nameccl38a.5
Descriptionchemokine (C-C motif) ligand 38, duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-041014-167]
OrganismDanio rerio (zebrafish)
Synonym(s)ccl-chr20c, ccl38ae, dr20_wga1544_1_382837, si:dkeyp-59a8.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
89.67
  • 89.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.89
  • 79.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
70.26
  • 70.26
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.11
  • 68.11
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.40
  • 65.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.94
  • 62.94
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.20
  • 61.20
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.17
  • 61.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.56
  • 52.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.37
  • 47.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.90
  • 43.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.64
  • 43.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.47
  • 41.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
1.83e4
  • 1.83e4
38.62
  • 38.62
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.03e4
  • 2.03e4
  • 2.13e4
32.04
  • 32.04
  • 28.62
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.31
  • 25.31
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.46e4
  • 2.46e4
17.70
  • 17.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX957287
EnsemblENSDARG00000041835 (ccl38a.5)
Uniprot/SPTREMBLQ5TYQ0, Q5TYQ0_DANRE
ZFINZDB-GENE-041014-167 (ccl38a.5)

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