D. rerio Gene: rh50 - ENSDARG00000041848 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041848
Namerh50
DescriptionRh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
OrganismDanio rerio (zebrafish)
Synonym(s)rhp2
Orthologs(s)4 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.56e3
  • 1.56e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.34e3
  • 8.34e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.28e4
  • 1.28e4
  • 2.74e4
57.07
  • 57.07
  • 8.11
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.35
  • 46.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.97e4
  • 1.97e4
  • 2.40e4
  • 2.40e4
  • 2.70e4
33.92
  • 33.92
  • 19.68
  • 19.57
  • 9.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.33
  • 25.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.68e4
  • 2.68e4
10.28
  • 10.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000041848.

Cross-references

EnsemblENSDARG00000041848 (rh50)
ZFINZDB-GENE-000427-1 (rh50)
EMBLCR751226
Uniprot/SPTREMBLB0UYU0, B0UYU0_DANRE

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