Gene: rh50 - ENSDARG00000041848 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000041848
Name	rh50
Description	Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
Organism	Danio rerio (zebrafish)
Synonym(s)	rhp2
Orthologs(s)	4 orthologs
Paralog(s)	5 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.56e3 1.56e3	94.80 94.80	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	8.34e3 8.34e3	72.06 72.06	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.28e4 1.28e4 2.74e4	57.07 57.07 8.11	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.35 46.35	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.92e4 1.92e4	35.78 35.78	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage	1.97e4 1.97e4 2.40e4 2.40e4 2.70e4	33.92 33.92 19.68 19.57 9.65	AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.23e4 2.23e4	25.33 25.33	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.68e4 2.68e4	10.28 10.28	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	4 species Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	4 genes ENSOANG00000004919 ENSGALG00000026892 ENSACAG00000006457 ENSXETG00000012058 rhag	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000041848.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Eumetazoa	5 genes ENSDARG00000003203 rhcga ENSDARG00000007080 rhcgl1 ENSDARG00000009018 rhbg ENSDARG00000019253 rhag ENSDARG00000100265 rhcgb	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000041848.

Cross-references

Ensembl	ENSDARG00000041848 (rh50)
ZFIN	ZDB-GENE-000427-1 (rh50)
EMBL	CR751226
Uniprot/SPTREMBL	B0UYU0, B0UYU0_DANRE