D. rerio Gene: si:ch211-245h14.1 - ENSDARG00000041911 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041911
Namesi:ch211-245h14.1
Descriptionsi:ch211-245h14.1 [Source:ZFIN;Acc:ZDB-GENE-041014-350]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.46
  • 92.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.67
  • 88.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
84.99
  • 84.99
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.18
  • 83.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.89
  • 82.89
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.83e3
  • 5.83e3
  • 1.82e4
80.47
  • 80.47
  • 38.98
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.90e3
  • 6.90e3
  • 1.41e4
76.89
  • 76.89
  • 52.71
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.85
  • 76.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.68
  • 72.68
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.12e4
  • 1.12e4
  • 1.21e4
62.42
  • 62.42
  • 59.45
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.58
  • 59.58
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.73
  • 58.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.57
  • 56.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.14
  • 55.14
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.38e4
  • 1.38e4
53.63
  • 53.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.39e4
  • 1.39e4
53.60
  • 53.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.29
  • 50.29
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.75e4
  • 1.75e4
  • 1.77e4
  • 1.87e4
  • 1.93e4
  • 2.03e4
41.43
  • 41.43
  • 40.85
  • 37.28
  • 35.34
  • 32.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.86e4
  • 1.86e4
  • 1.89e4
37.81
  • 37.81
  • 36.75
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX569783
EnsemblENSDARG00000041911 (si:ch211-245h14.1)
Uniprot/SPTREMBLF1QXH6, F1QXH6_DANRE
ZFINZDB-GENE-041014-350 (si:ch211-245h14.1)

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