D. rerio Gene: cxcr4b - ENSDARG00000041959 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041959
Namecxcr4b
Descriptionchemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cb403, cxcr4, drcxcr4b1, ody, odysseus, zgc:109863
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
151
  • 151
99.50
  • 99.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
  • ZFS:0000039Larval:Days 7-13
425
  • 425
  • 1.49e4
98.58
  • 98.58
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
610
  • 610
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
650
  • 650
  • 679
  • 786
  • 1.87e3
  • 1.95e3
  • 6.64e3
  • 7.91e3
97.83
  • 97.83
  • 97.73
  • 97.37
  • 93.75
  • 93.48
  • 77.77
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
650
  • 650
  • 747
  • 4.48e3
  • 1.17e4
97.83
  • 97.83
  • 97.50
  • 84.99
  • 60.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
679
  • 679
  • 679
  • 747
  • 747
  • 2.67e3
97.73
  • 97.73
  • 97.73
  • 97.50
  • 97.50
  • 91.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
712
  • 712
  • 786
  • 879
97.62
  • 97.62
  • 97.37
  • 97.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
713
  • 713
  • 3.55e3
  • 3.59e3
  • 5.39e3
  • 8.21e3
  • 9.95e3
97.62
  • 97.62
  • 88.11
  • 87.97
  • 81.97
  • 72.49
  • 66.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
747
  • 747
  • 747
  • 934
  • 934
  • 1.36e3
97.50
  • 97.50
  • 97.50
  • 96.88
  • 96.88
  • 95.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
747
  • 747
  • 786
  • 786
97.50
  • 97.50
  • 97.37
  • 97.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
747
  • 747
  • 747
  • 1.30e3
  • 4.48e3
97.50
  • 97.50
  • 97.50
  • 95.65
  • 84.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
747
  • 747
  • 830
  • 830
  • 934
  • 4.98e3
  • 1.49e4
97.50
  • 97.50
  • 97.22
  • 97.22
  • 96.88
  • 83.34
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
786
  • 786
  • 830
  • 2.49e3
  • 7.47e3
  • 7.47e3
97.37
  • 97.37
  • 97.22
  • 91.66
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
786
  • 786
  • 786
  • 830
  • 830
  • 1.42e3
97.37
  • 97.37
  • 97.37
  • 97.22
  • 97.22
  • 95.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
786
  • 786
  • 786
  • 1.42e3
  • 1.49e3
  • 1.49e3
  • 7.91e3
  • 7.91e3
97.37
  • 97.37
  • 97.37
  • 95.24
  • 95.00
  • 95.00
  • 73.52
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
830
  • 830
  • 879
  • 3.56e3
97.22
  • 97.22
  • 97.06
  • 88.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
830
  • 830
  • 830
  • 830
  • 1.07e3
  • 1.07e3
  • 3.73e3
  • 3.73e3
97.22
  • 97.22
  • 97.22
  • 97.22
  • 96.43
  • 96.43
  • 87.50
  • 87.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
879
  • 879
  • 879
  • 1.40e4
97.06
  • 97.06
  • 97.06
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
977
  • 977
  • 2.47e3
  • 5.88e3
  • 1.09e4
  • 1.10e4
96.73
  • 96.73
  • 91.72
  • 80.31
  • 63.37
  • 63.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.57
  • 96.57
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.07e3
  • 1.07e3
  • 1.15e3
  • 1.15e3
96.43
  • 96.43
  • 96.16
  • 96.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e3
  • 1.11e3
96.28
  • 96.28
AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.15e3
  • 1.15e3
  • 1.24e3
  • 1.24e3
96.16
  • 96.16
  • 95.84
  • 95.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.24e3
  • 1.24e3
  • 1.36e3
  • 1.36e3
  • 2.13e3
  • 2.49e3
95.84
  • 95.84
  • 95.46
  • 95.46
  • 92.86
  • 91.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.27e3
  • 1.27e3
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
  • 1.78e3
  • 6.38e3
  • 6.72e3
  • 1.45e4
  • 1.65e4
95.65
  • 95.65
  • 94.04
  • 78.64
  • 77.49
  • 51.51
  • 44.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001157posterior lateral line primordium
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.36e3
  • 1.36e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
95.46
  • 95.46
  • 75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010170region of neural crest
  • ZFS:0000026Segmentation:14-19 somites
1.49e3
  • 1.49e3
95.00
  • 95.00
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.66e3
  • 1.66e3
  • 1.87e3
  • 2.72e3
  • 1.34e4
94.45
  • 94.45
  • 93.75
  • 90.91
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
  • 3.56e3
  • 8.31e3
  • 1.01e4
  • 1.05e4
  • 1.06e4
  • 1.09e4
  • 1.11e4
  • 1.12e4
  • 1.12e4
  • 1.27e4
  • 1.29e4
  • 1.29e4
  • 1.36e4
  • 1.39e4
  • 1.39e4
  • 1.50e4
94.01
  • 94.01
  • 88.10
  • 72.16
  • 66.24
  • 64.82
  • 64.54
  • 63.37
  • 62.72
  • 62.62
  • 62.40
  • 57.49
  • 56.80
  • 56.65
  • 54.57
  • 53.44
  • 53.36
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005721pronephric mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.87e3
  • 1.87e3
  • 3.32e3
  • 3.32e3
93.75
  • 93.75
  • 88.89
  • 88.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
2.13e3
  • 2.13e3
  • 2.13e3
  • 4.27e3
  • 1.12e4
92.86
  • 92.86
  • 92.86
  • 85.71
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
2.13e3
  • 2.13e3
  • 1.49e4
  • 1.49e4
92.86
  • 92.86
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.23e3
  • 2.23e3
  • 1.31e4
92.53
  • 92.53
  • 56.15
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.26e3
  • 2.26e3
92.45
  • 92.45
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.49e3
  • 2.49e3
  • 2.99e3
91.67
  • 91.67
  • 90.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.27e3
  • 3.27e3
  • 1.31e4
89.05
  • 89.05
  • 56.09
AEIR
  • AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
3.45e3
  • 3.45e3
  • 3.45e3
  • 4.27e3
88.46
  • 88.46
  • 88.46
  • 85.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.75
  • 87.75
AEIR
  • AEIR
UBERON:2007025midbrain neural keel
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
3.73e3
  • 3.73e3
  • 4.98e3
  • 4.98e3
87.50
  • 87.50
  • 83.33
  • 83.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000026Segmentation:14-19 somites
3.73e3
  • 3.73e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.91e3
  • 3.91e3
  • 7.06e3
86.91
  • 86.91
  • 76.36
AEIR
  • AEIR
  • AEIR
UBERON:2007026forebrain neural keel
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
4.27e3
  • 4.27e3
  • 4.60e3
  • 4.60e3
85.71
  • 85.71
  • 84.61
  • 84.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.42
  • 85.42
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.73e3
  • 4.73e3
84.18
  • 84.18
AEIR
  • AEIR
UBERON:0014371future telencephalon
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
5.34e3
  • 5.34e3
  • 5.75e3
  • 6.22e3
82.14
  • 82.14
  • 80.76
  • 79.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
5.67e3
  • 5.67e3
  • 6.23e3
  • 6.79e3
  • 7.30e3
  • 1.34e4
81.02
  • 81.02
  • 79.15
  • 77.26
  • 75.55
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
5.81e3
  • 5.81e3
  • 5.81e3
  • 6.15e3
  • 1.19e4
  • 1.31e4
80.55
  • 80.55
  • 80.55
  • 79.40
  • 60.00
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
6.89e3
  • 6.89e3
  • 7.97e3
  • 8.54e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.96e3
  • 1.08e4
76.92
  • 76.92
  • 73.32
  • 71.42
  • 71.41
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.04e3
  • 7.04e3
  • 7.44e3
  • 7.84e3
  • 9.15e3
  • 9.15e3
  • 9.30e3
  • 1.07e4
  • 1.19e4
  • 1.20e4
  • 1.33e4
76.43
  • 76.43
  • 75.10
  • 73.74
  • 69.38
  • 69.35
  • 68.85
  • 64.10
  • 60.04
  • 59.99
  • 55.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.07
  • 76.07
AEIR
  • AEIR
CL:0000740retinal ganglion cell
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 75.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015238pineal complex
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
ZFA:0000197dorsal habenular nucleus (Danio)
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.59e3
  • 7.59e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
68.00
  • 68.00
AEIR
  • AEIR
UBERON:0001899epithalamus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.20e4
  • 1.34e4
64.86
  • 64.86
  • 59.87
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
  • 1.37e4
  • 1.49e4
  • 1.49e4
63.32
  • 63.32
  • 54.15
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015241parapineal organ
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
CL:0000670primordial germ cell
  • ZFS:0000029Pharyngula:Prim-5
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.17e4
  • 1.17e4
  • 1.30e4
  • 1.49e4
60.83
  • 60.83
  • 56.49
  • 50.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.23e4
  • 1.23e4
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0005511rhombomere 4
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
1.25e4
  • 1.25e4
  • 1.33e4
  • 1.34e4
  • 1.36e4
58.31
  • 58.31
  • 55.53
  • 55.24
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000247Rohon-Beard neuron
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
1.31e4
  • 1.31e4
  • 1.49e4
  • 1.49e4
56.24
  • 56.24
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001904habenula
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.31e4
  • 1.31e4
  • 1.49e4
56.24
  • 56.24
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.35e4
  • 1.35e4
  • 1.40e4
54.73
  • 54.73
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
1.37e4
  • 1.37e4
  • 1.49e4
  • 1.49e4
54.15
  • 54.15
  • 49.99
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006222future diencephalon
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.37e4
  • 1.37e4
  • 1.38e4
54.15
  • 54.15
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
CL:0000100motor neuron
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000246Mauthner neuron
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002148locus ceruleus
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0003936postoptic commissure
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0009955neurogenic placode
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001156posterior lateral line placode
  • ZFS:0000027Segmentation:20-25 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005227protoneuromast
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0001473deep blastomere (Danio)
  • ZFS:0000011Blastula:1k-cell
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001707nasal cavity
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005115primary posterior lateral line primordium
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001431primitive olfactory epithelium
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0005519rhombomere 6
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000041959.

Cross-references

EnsemblENSDARG00000041959 (cxcr4b)
ZFINZDB-GENE-010614-1 (cxcr4b)
EMBLAF201451, AY057094, CU694482
Uniprot/SPTREMBLQ9PTF7, Q9PTF7_DANRE

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