D. rerio Gene: brk1 - ENSDARG00000041974 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000041974
Namebrk1
DescriptionBRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:86903

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
531
  • 531
  • 901
  • 2.49e3
98.22647
  • 98.22647
  • 96.98677
  • 91.65998
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
738
  • 738
97.53206
  • 97.53206
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
751
  • 751
97.48980
  • 97.48980
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
763
  • 763
  • 831
  • 961
  • 962
  • 973
  • 988
  • 1.00e3
  • 1.44e3
  • 1.84e3
  • 2.30e3
97.44704
  • 97.44704
  • 97.22211
  • 96.78468
  • 96.78100
  • 96.74360
  • 96.69373
  • 96.64263
  • 95.18803
  • 93.82557
  • 92.30935
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
803
  • 803
  • 959
97.31527
  • 97.31527
  • 96.79202
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
831
  • 831
  • 1.47e4
97.22094
  • 97.22094
  • 50.87948
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
909
  • 909
  • 1.44e3
96.96008
  • 96.96008
  • 95.17168
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
914
  • 914
  • 926
  • 939
  • 985
  • 1.05e3
  • 1.10e3
  • 1.10e3
  • 1.15e3
  • 1.16e3
  • 1.25e3
  • 1.33e3
  • 1.40e3
  • 1.60e3
  • 2.52e3
  • 1.29e4
  • 1.45e4
  • 1.47e4
  • 1.49e4
96.94267
  • 96.94267
  • 96.90389
  • 96.85829
  • 96.70452
  • 96.47577
  • 96.32160
  • 96.30898
  • 96.15250
  • 96.13127
  • 95.82909
  • 95.55591
  • 95.31996
  • 94.63088
  • 91.55045
  • 56.67903
  • 51.51395
  • 50.90001
  • 50.24726
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
925
  • 925
96.90704
  • 96.90704
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.01e3
  • 1.01e3
  • 1.09e3
  • 1.22e3
96.62174
  • 96.62174
  • 96.35130
  • 95.92365
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.48394
  • 96.48394
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.06e3
  • 1.06e3
96.46466
  • 96.46466
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
  • 1.77e3
96.41754
  • 96.41754
  • 94.06691
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.07e3
  • 1.07e3
96.41232
  • 96.41232
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.79748
  • 95.79748
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.76345
  • 95.76345
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.73050
  • 95.73050
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.29e3
  • 1.29e3
  • 1.47e3
  • 1.89e3
  • 1.89e3
  • 2.45e3
  • 2.51e3
95.67140
  • 95.67140
  • 95.07179
  • 93.68426
  • 93.65965
  • 91.78472
  • 91.60325
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.49891
  • 95.49891
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.35891
  • 95.35891
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.55e3
  • 1.55e3
94.81418
  • 94.81418
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
  • 1.69e3
  • 1.96e3
  • 4.17e3
94.48163
  • 94.48163
  • 94.32800
  • 93.45093
  • 86.04956
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.34417
  • 94.34417
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.70e3
  • 1.70e3
  • 2.65e3
  • 3.79e3
  • 3.99e3
  • 4.03e3
94.31223
  • 94.31223
  • 91.14500
  • 87.32030
  • 86.63895
  • 86.52011
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.73e3
  • 1.73e3
94.21897
  • 94.21897
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
93.90885
  • 93.90885
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.89e3
  • 1.89e3
93.68576
  • 93.68576
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.41098
  • 93.41098
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.94110
  • 92.94110
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.58825
  • 91.58825
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
  • 1.46e4
90.77186
  • 90.77186
  • 51.25717
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.28832
  • 90.28832
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
6.08e3
  • 6.08e3
79.64732
  • 79.64732
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
78.56977
  • 78.56977
  • 78.56977
  • 78.56977
  • 77.77444
  • 76.91638
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 74.99833
  • 73.32328
  • 71.42521
  • 71.41181
  • 70.82497
  • 70.57483
  • 70.57483
  • 69.98828
  • 69.98326
  • 69.42936
  • 69.42936
  • 69.42936
  • 67.48157
  • 66.65998
  • 66.65328
  • 49.96651
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
74.98995
  • 74.98995
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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