D. rerio Gene: si:ch211-63o20.7 - ENSDARG00000042000 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042000
Namesi:ch211-63o20.7
Descriptionsi:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153238

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.11
  • 93.11
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.24e3
  • 3.24e3
  • 5.82e3
89.14
  • 89.14
  • 80.53
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.47e3
  • 3.47e3
  • 4.61e3
88.40
  • 88.40
  • 84.57
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.73e3
  • 4.73e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.03e3
  • 6.03e3
79.81
  • 79.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
  • 1.47e4
78.25
  • 78.25
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.07e3
  • 7.07e3
  • 8.13e3
  • 9.21e3
  • 1.36e4
  • 1.84e4
76.32
  • 76.32
  • 72.77
  • 69.17
  • 54.32
  • 38.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.89
  • 74.89
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.48
  • 72.48
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.09e3
  • 9.09e3
  • 1.83e4
69.57
  • 69.57
  • 38.56
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.92
  • 67.92
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.29e4
  • 1.29e4
56.76
  • 56.76
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.56
  • 53.56
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 2.37e4
52.09
  • 52.09
  • 20.68
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.04
  • 47.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.37
  • 42.37
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.31
  • 38.31
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.63
  • 36.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX279523
EnsemblENSDARG00000042000 (si:ch211-63o20.7)
Uniprot/SPTREMBLQ5RIC1, Q5RIC1_DANRE
ZFINZDB-GENE-041001-194 (si:ch211-63o20.7)

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