D. rerio Gene: mnx2a - ENSDARG00000042106 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042106
Namemnx2a
Descriptionmotor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
OrganismDanio rerio (zebrafish)
Synonym(s)hlxb9la, hlxb9la {eco:0000313|embl:aai62692.1,gn eco:0000313|zfin:zdb-gene-040415-1}, mnr2a
Orthologs(s)2 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000532CAP motoneuron
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.12e4
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 62.50
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
8.96e3
  • 8.96e3
  • 1.49e4
69.99
  • 69.99
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.03e3
  • 9.03e3
  • 1.49e4
69.78
  • 69.78
  • 50.21
AEIR
  • AEIR
  • AEIR
UBERON:0003924ventral pancreatic bud
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 9.96e3
66.67
  • 66.67
  • 66.67
AEIR
  • AEIR
  • AEIR
ZFA:0005181VaP motor neuron (Danio)
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000016endocrine pancreas
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
66.66
  • 66.66
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.11e4
  • 1.11e4
  • 1.24e4
  • 1.99e4
63.29
  • 63.29
  • 62.76
  • 62.70
  • 58.56
  • 33.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000017exocrine pancreas
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:2007042spinal cord neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
ZFA:0005179MiP motor neuron (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
  • 1.49e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005180RoP motor neuron (Danio)
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
  • 1.49e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
  • 1.49e4
58.32
  • 58.32
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
  • 1.36e4
57.11
  • 57.11
  • 54.52
AEIR
  • AEIR
  • AEIR
UBERON:0003854spinal cord neural plate
  • ZFS:0000022Gastrula:Bud
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2007028spinal cord neural keel
  • ZFS:0000023Segmentation:1-4 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2007035spinal cord neural rod
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005519rhombomere 6
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.75
  • 40.75
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.08
  • 32.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.48
  • 26.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000042106.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000042106.

Cross-references

EnsemblENSDARG00000042106 (mnx2a)
ZFINZDB-GENE-040415-1 (mnx2a)
EMBLBC162692, BC162717, CU693367
Uniprot/SPTREMBLB3DHA2, B3DHA2_DANRE

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