D. rerio Gene: dio1 - ENSDARG00000042112 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042112
Namedio1
Descriptiondeiodinase, iodothyronine, type I [Source:ZFIN;Acc:ZDB-GENE-030328-41]
OrganismDanio rerio (zebrafish)
Synonym(s)cb685, deio1, zgc:92323

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
872
  • 872
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
940
  • 940
  • 1.35e4
96.86
  • 96.86
  • 54.73
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
93.69
  • 93.69
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
  • 3.20e3
  • 3.32e3
  • 3.98e3
  • 4.48e3
  • 4.98e3
  • 1.14e4
  • 1.20e4
  • 1.29e4
  • 1.41e4
  • 1.43e4
92.86
  • 92.86
  • 89.28
  • 88.89
  • 86.66
  • 85.00
  • 83.34
  • 61.88
  • 59.98
  • 56.65
  • 52.75
  • 52.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.67
  • 92.67
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.29
  • 89.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
4.58e3
  • 4.58e3
  • 1.21e4
  • 1.32e4
84.67
  • 84.67
  • 59.59
  • 55.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
83.95
  • 83.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.53
  • 83.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.83
  • 76.83
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.58e3
  • 7.58e3
  • 1.50e4
  • 1.55e4
74.61
  • 74.61
  • 49.86
  • 47.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.02
  • 74.02
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
8.18e3
  • 8.18e3
  • 1.58e4
  • 1.71e4
  • 1.91e4
  • 2.32e4
72.63
  • 72.63
  • 47.20
  • 42.65
  • 36.07
  • 22.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.79
  • 70.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.67e3
  • 9.67e3
  • 1.30e4
  • 1.32e4
  • 1.65e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
67.63
  • 67.63
  • 56.31
  • 55.92
  • 44.78
  • 40.56
  • 40.38
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.13
  • 65.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.29
  • 62.29
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.13e4
  • 1.13e4
  • 1.44e4
62.18
  • 62.18
  • 51.76
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.22e4
  • 1.49e4
61.27
  • 61.27
  • 59.08
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.13
  • 60.13
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.04
  • 56.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.40
  • 55.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.56e4
  • 1.56e4
47.72
  • 47.72
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.56e4
  • 1.56e4
  • 1.66e4
  • 1.75e4
47.62
  • 47.62
  • 44.55
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.60e4
  • 1.60e4
  • 1.61e4
46.33
  • 46.33
  • 46.04
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.68e4
  • 1.68e4
43.78
  • 43.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000042112 (dio1)
Uniprot/SPTREMBLF1R7E6, F1R7E6_DANRE
ZFINZDB-GENE-030328-41 (dio1)

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