D. rerio Gene: cdca4 - ENSDARG00000042319 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042319
Namecdca4
Descriptioncell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
OrganismDanio rerio (zebrafish)
Synonym(s)fb78b08, si:dkey-177p2.7, si:dkey-177p2.7 {eco:0000313|ensembl:ensdarp00000123471,gn eco:0000313|zfin:zdb-gene-030131-1695}, wu:fb78b08, zgc:92217, zgc:92217gn
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
232
  • 232
  • 2.65e3
  • 2.98e3
  • 8.68e3
99.23
  • 99.23
  • 91.15
  • 90.04
  • 70.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
817
  • 817
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
825
  • 825
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
925
  • 925
  • 1.28e3
  • 1.32e3
  • 1.81e3
  • 2.30e3
  • 3.69e3
  • 5.26e3
  • 5.48e3
  • 5.64e3
  • 6.54e3
96.91
  • 96.91
  • 95.71
  • 95.58
  • 93.96
  • 92.30
  • 87.65
  • 82.39
  • 81.67
  • 81.13
  • 78.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.04e3
  • 1.04e3
96.52
  • 96.52
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.08
  • 96.08
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.01
  • 96.01
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.41e3
  • 1.41e3
  • 1.71e3
95.30
  • 95.30
  • 94.28
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.48e3
  • 1.48e3
  • 1.86e3
  • 7.23e3
  • 8.58e3
  • 8.76e3
95.04
  • 95.04
  • 93.77
  • 75.80
  • 71.27
  • 70.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.91
  • 94.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
1.54e3
  • 1.54e3
  • 2.57e3
  • 4.77e3
  • 5.10e3
  • 5.77e3
  • 6.83e3
94.84
  • 94.84
  • 91.41
  • 84.02
  • 82.92
  • 80.68
  • 77.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.76e3
  • 1.76e3
  • 3.91e3
94.11
  • 94.11
  • 86.90
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.21
  • 92.21
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.94
  • 91.94
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
91.29
  • 91.29
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
  • 3.03e3
90.16
  • 90.16
  • 89.86
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.11e3
  • 3.11e3
  • 4.84e3
  • 6.81e3
89.60
  • 89.60
  • 83.79
  • 77.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.73e3
  • 3.73e3
87.50
  • 87.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.82
  • 86.82
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.97e3
  • 3.97e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.08e3
  • 4.08e3
86.35
  • 86.35
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
  • 4.59e3
  • 5.32e3
  • 5.45e3
  • 5.50e3
  • 5.61e3
  • 5.96e3
  • 6.00e3
  • 6.19e3
  • 6.39e3
  • 6.84e3
  • 7.03e3
  • 8.32e3
  • 8.59e3
  • 1.40e4
  • 1.45e4
  • 1.47e4
85.21
  • 85.21
  • 84.64
  • 82.18
  • 81.75
  • 81.60
  • 81.20
  • 80.05
  • 79.91
  • 79.28
  • 78.60
  • 77.11
  • 76.46
  • 72.13
  • 71.23
  • 53.03
  • 51.56
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.72e3
  • 4.72e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
  • 6.80e3
81.46
  • 81.46
  • 77.24
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.17
  • 79.17
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.23e3
  • 6.23e3
79.16
  • 79.16
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.44
  • 78.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000042319 (cdca4)
ZFINZDB-GENE-030131-1695 (cdca4)
EMBLBC086964, BX248515
Uniprot/SPTREMBLF6NH38, F6NH38_DANRE, Q5RIK2, Q5RIK2_DANRE, U3JAG7, U3JAG7_DANRE

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