D. rerio Gene: cldnk - ENSDARG00000042357 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042357
Namecldnk
Descriptionclaudin k [Source:ZFIN;Acc:ZDB-GENE-040801-201]
OrganismDanio rerio (zebrafish)
Synonym(s)claudin 31, zgc:91878
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.05e3
  • 2.05e3
  • 1.40e4
93.14
  • 93.14
  • 53.04
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.69
  • 84.69
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.97e3
  • 5.97e3
  • 9.34e3
  • 1.17e4
80.01
  • 80.01
  • 68.72
  • 60.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.80
  • 79.80
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
6.43e3
  • 6.43e3
  • 6.88e3
  • 7.31e3
  • 8.19e3
  • 9.60e3
  • 9.83e3
  • 1.01e4
  • 1.01e4
  • 1.03e4
  • 1.10e4
  • 1.10e4
  • 1.10e4
  • 1.14e4
  • 1.18e4
  • 1.20e4
  • 1.23e4
78.46
  • 78.46
  • 76.96
  • 75.51
  • 72.57
  • 67.87
  • 67.07
  • 66.33
  • 66.04
  • 65.61
  • 63.31
  • 63.29
  • 63.22
  • 61.75
  • 60.42
  • 59.68
  • 58.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.70e3
  • 6.70e3
  • 1.06e4
77.57
  • 77.57
  • 64.54
AEIR
  • AEIR
  • AEIR
UBERON:0004535cardiovascular system
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0008906lateral line nerve
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.89e3
  • 7.89e3
  • 9.94e3
73.57
  • 73.57
  • 66.72
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
8.60e3
  • 8.60e3
  • 1.29e4
  • 1.30e4
  • 1.33e4
  • 1.37e4
  • 1.61e4
  • 1.61e4
  • 1.77e4
  • 1.92e4
71.20
  • 71.20
  • 56.69
  • 56.44
  • 55.55
  • 54.14
  • 46.21
  • 46.15
  • 40.75
  • 35.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
8.96e3
  • 8.96e3
  • 9.96e3
69.99
  • 69.99
  • 66.65
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.51e3
  • 9.51e3
68.17
  • 68.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.88e3
  • 9.88e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.49e4
65.37
  • 65.37
  • 64.27
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.05e4
  • 1.05e4
  • 1.06e4
  • 1.09e4
  • 1.14e4
  • 1.25e4
  • 1.53e4
64.93
  • 64.93
  • 64.55
  • 63.49
  • 61.92
  • 58.11
  • 48.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.88
  • 54.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.46
  • 53.46
AEIR
  • AEIR
CL:0000128oligodendrocyte
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.93
  • 41.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
  • 1.97e4
39.85
  • 39.85
  • 34.02
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.37
  • 28.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata11 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000042357.

Cross-references

EnsemblENSDARG00000042357 (cldnk)
ZFINZDB-GENE-040801-201 (cldnk)
EMBLBC078365, BC165033, BX682554
Uniprot/SPTREMBLQ6DBT9, Q6DBT9_DANRE

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