D. rerio Gene: cacna1sb - ENSDARG00000042552 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042552
Namecacna1sb
Descriptioncalcium channel, voltage-dependent, L type, alpha 1S subunit, b [Source:ZFIN;Acc:ZDB-GENE-051227-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cacna1s, cav1.1a1sb, zfcav1.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
664
  • 664
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
742
  • 742
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
95.00
  • 95.00
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
4.06e3
  • 4.06e3
  • 5.34e3
  • 5.71e3
  • 7.22e3
  • 8.36e3
86.40
  • 86.40
  • 82.13
  • 80.89
  • 75.83
  • 72.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.56
  • 77.56
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.14e3
  • 7.14e3
  • 7.58e3
76.11
  • 76.11
  • 74.63
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.90e3
  • 9.90e3
66.85
  • 66.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.62
  • 47.62
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
  • 2.22e4
42.01
  • 42.01
  • 25.68
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.00
  • 35.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAY495698, BX544876
EnsemblENSDARG00000042552 (cacna1sb)
Uniprot/SPTREMBLQ6RKB0, Q6RKB0_DANRE
ZFINZDB-GENE-051227-1 (cacna1sb)

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