D. rerio Gene: crp3 - ENSDARG00000042613 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042613
Namecrp3
DescriptionC-reactive protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-220]
OrganismDanio rerio (zebrafish)
Synonym(s)ptx3, si:ch211-234p6.12

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
70.1
  • 70.1
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
482
  • 482
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
753
  • 753
97.48
  • 97.48
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
813
  • 813
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
906
  • 906
  • 1.18e4
96.97
  • 96.97
  • 60.59
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.36e3
  • 2.36e3
  • 1.09e4
  • 1.20e4
  • 1.54e4
  • 1.54e4
  • 1.56e4
  • 1.60e4
  • 1.66e4
92.11
  • 92.11
  • 63.62
  • 59.81
  • 48.59
  • 48.40
  • 47.86
  • 46.43
  • 44.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
3.22e3
  • 3.22e3
  • 1.48e4
  • 1.50e4
  • 1.60e4
  • 2.01e4
  • 2.10e4
  • 2.31e4
  • 2.77e4
89.22
  • 89.22
  • 50.44
  • 49.90
  • 46.26
  • 32.78
  • 29.67
  • 22.68
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
3.24e3
  • 3.24e3
  • 9.14e3
  • 1.25e4
89.15
  • 89.15
  • 69.39
  • 58.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.02e3
  • 6.02e3
79.86
  • 79.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.65
  • 78.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.33
  • 65.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.59
  • 59.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.23e4
  • 1.23e4
  • 1.38e4
  • 1.63e4
  • 1.68e4
58.75
  • 58.75
  • 53.94
  • 45.39
  • 43.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.96
  • 56.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.56e4
  • 1.56e4
  • 1.78e4
47.72
  • 47.72
  • 40.32
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.05
  • 47.05
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
  • 2.02e4
45.15
  • 45.15
  • 32.32
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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