D. rerio Gene: cebpb - ENSDARG00000042725 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042725
Namecebpb
DescriptionCCAAT/enhancer binding protein (C/EBP), beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
OrganismDanio rerio (zebrafish)
Synonym(s)c/ebpb, cb380, fe11e05, q6p611, wu:fe11e05

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
453
  • 453
98.47228
  • 98.47228
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
459
  • 459
98.45200
  • 98.45200
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
525
  • 525
  • 1.24e3
  • 2.24e3
  • 3.07e3
  • 3.27e3
98.22750
  • 98.22750
  • 95.82627
  • 92.44534
  • 89.63909
  • 88.95263
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
745
  • 745
97.48595
  • 97.48595
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
857
  • 857
97.10679
  • 97.10679
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
924
  • 924
  • 5.73e3
96.87938
  • 96.87938
  • 80.62588
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
959
  • 959
96.76099
  • 96.76099
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.48e3
  • 1.48e3
  • 1.18e4
94.99772
  • 94.99772
  • 59.99662
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.51439
  • 94.51439
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
  • 4.02e3
93.40578
  • 93.40578
  • 86.41693
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000109gastrula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000049segmentation
2.09e3
  • 2.09e3
  • 3.27e3
  • 3.30e3
  • 4.28e3
  • 5.45e3
  • 6.48e3
  • 6.92e3
  • 7.01e3
  • 7.82e3
  • 7.83e3
  • 7.97e3
  • 8.15e3
  • 9.09e3
  • 1.17e4
  • 1.28e4
  • 1.34e4
  • 1.38e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
92.94908
  • 92.94908
  • 88.96544
  • 88.85499
  • 85.53120
  • 81.56729
  • 78.11543
  • 76.60324
  • 76.32160
  • 73.58627
  • 73.53710
  • 73.07733
  • 72.44087
  • 69.29328
  • 60.40434
  • 56.79259
  • 54.65280
  • 53.31307
  • 49.99493
  • 49.98310
  • 49.94930
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.70230
  • 91.70230
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
3.09e3
  • 3.09e3
  • 8.63e3
  • 8.88e3
  • 1.06e4
  • 1.11e4
  • 1.16e4
89.56362
  • 89.56362
  • 70.82487
  • 69.98817
  • 64.26374
  • 62.48309
  • 60.69907
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.59270
  • 88.59270
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.67e3
  • 3.67e3
  • 3.94e3
  • 4.18e3
  • 5.57e3
  • 6.25e3
  • 6.33e3
  • 6.45e3
  • 6.69e3
  • 7.10e3
  • 1.26e4
87.60982
  • 87.60982
  • 86.68666
  • 85.86855
  • 81.18094
  • 78.89240
  • 78.61467
  • 78.21010
  • 77.38688
  • 75.99498
  • 57.37742
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
3.70e3
  • 3.70e3
  • 5.92e3
  • 1.06e4
  • 1.06e4
  • 1.18e4
  • 1.32e4
87.50170
  • 87.50170
  • 80.00000
  • 64.28063
  • 64.28063
  • 59.98986
  • 55.54540
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
4.83e3
  • 4.83e3
  • 6.06e3
  • 6.31e3
83.68783
  • 83.68783
  • 79.53573
  • 78.66182
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
4.93e3
  • 4.93e3
  • 1.11e4
  • 1.21e4
  • 1.21e4
  • 1.33e4
  • 1.33e4
  • 1.33e4
83.32996
  • 83.32996
  • 62.49323
  • 59.07907
  • 59.07907
  • 54.98815
  • 54.98815
  • 54.98815
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.34e3
  • 6.34e3
  • 1.09e4
  • 1.27e4
  • 1.27e4
  • 1.27e4
  • 1.27e4
  • 1.27e4
78.56975
  • 78.56975
  • 63.31813
  • 57.13609
  • 57.13609
  • 57.13609
  • 57.13609
  • 57.13609
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.58e3
  • 6.58e3
77.75638
  • 77.75638
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.21e3
  • 8.21e3
  • 9.20e3
72.25296
  • 72.25296
  • 68.91568
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.11e3
  • 9.11e3
  • 9.25e3
  • 9.51e3
  • 1.02e4
  • 1.06e4
  • 1.43e4
69.22062
  • 69.22062
  • 68.74493
  • 67.84530
  • 65.60979
  • 64.28063
  • 51.51488
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.17961
  • 64.17961
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.09e4
  • 1.09e4
  • 1.09e4
  • 1.09e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
63.31813
  • 63.31813
  • 63.31813
  • 63.31813
  • 62.48309
  • 61.74610
  • 61.74610
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.48e4
61.97239
  • 61.97239
  • 49.91550
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
61.07245
  • 61.07245
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.23e4
  • 1.23e4
58.47613
  • 58.47613
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
53.89161
  • 53.89161
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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