D. rerio Gene: cebpb - ENSDARG00000042725 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042725
Namecebpb
DescriptionCCAAT/enhancer binding protein (C/EBP), beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
OrganismDanio rerio (zebrafish)
Synonym(s)c/ebpb, cb380, fe11e05, q6p611, wu:fe11e05

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
83.0
  • 83.0
99.72541
  • 99.72541
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
453
  • 453
98.48642
  • 98.48642
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
529
  • 529
  • 600
  • 1.24e3
  • 2.08e3
  • 2.25e3
  • 3.09e3
98.23129
  • 98.23129
  • 97.99558
  • 95.83528
  • 93.04115
  • 92.46164
  • 89.66149
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
750
  • 750
  • 1.10e3
  • 1.34e4
97.49134
  • 97.49134
  • 96.32994
  • 55.22881
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
857
  • 857
97.13358
  • 97.13358
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
924
  • 924
96.91069
  • 96.91069
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
931
  • 931
  • 5.77e3
96.88605
  • 96.88605
  • 80.66775
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
931
  • 931
96.88578
  • 96.88578
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
95.95496
  • 95.95496
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000035Larval:Protruding-mouth
1.43e3
  • 1.43e3
  • 8.71e3
  • 8.96e3
  • 1.07e4
  • 1.12e4
  • 1.17e4
95.19837
  • 95.19837
  • 70.82497
  • 69.98828
  • 64.26394
  • 62.48324
  • 60.69923
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.13629
  • 95.13629
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.48e3
  • 1.48e3
  • 1.19e4
95.04403
  • 95.04403
  • 59.99665
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.56518
  • 94.56518
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
  • 4.02e3
93.46683
  • 93.46683
  • 86.54643
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000109gastrula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000049segmentation
2.10e3
  • 2.10e3
  • 3.29e3
  • 3.32e3
  • 4.31e3
  • 5.49e3
  • 6.52e3
  • 6.97e3
  • 7.06e3
  • 7.87e3
  • 7.89e3
  • 8.02e3
  • 8.21e3
  • 9.15e3
  • 1.18e4
  • 1.29e4
  • 1.35e4
  • 1.39e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
92.96417
  • 92.96417
  • 88.98932
  • 88.87905
  • 85.56250
  • 81.60714
  • 78.16278
  • 76.65385
  • 76.37280
  • 73.64337
  • 73.59431
  • 73.13518
  • 72.49998
  • 69.35961
  • 60.48997
  • 56.79413
  • 54.65452
  • 53.31323
  • 49.99498
  • 49.98326
  • 49.94977
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.77912
  • 91.77912
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.61e3
  • 3.61e3
  • 5.72e3
  • 6.10e3
87.89941
  • 87.89941
  • 80.86565
  • 79.57998
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.68e3
  • 3.68e3
  • 3.94e3
  • 4.18e3
  • 4.55e3
  • 5.61e3
  • 6.37e3
  • 6.49e3
  • 6.74e3
  • 7.12e3
  • 1.27e4
87.69434
  • 87.69434
  • 86.81047
  • 85.99940
  • 84.75344
  • 81.22165
  • 78.66092
  • 78.25721
  • 77.43579
  • 76.15936
  • 57.46961
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
3.73e3
  • 3.73e3
  • 5.97e3
  • 1.07e4
  • 1.07e4
  • 1.19e4
  • 1.33e4
87.50166
  • 87.50166
  • 80.00000
  • 64.28068
  • 64.28068
  • 59.98995
  • 55.54552
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.86e3
  • 3.86e3
  • 8.08e3
87.08649
  • 87.08649
  • 72.94625
AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
4.98e3
  • 4.98e3
  • 1.12e4
  • 1.22e4
  • 1.22e4
  • 1.34e4
  • 1.34e4
  • 1.34e4
83.32997
  • 83.32997
  • 62.49329
  • 59.07919
  • 59.07919
  • 54.98828
  • 54.98828
  • 54.98828
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.10e3
  • 6.10e3
79.59318
  • 79.59318
AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.40e3
  • 6.40e3
  • 1.10e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
78.56977
  • 78.56977
  • 63.31825
  • 57.13616
  • 57.13616
  • 57.13616
  • 57.13616
  • 57.13616
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.80447
  • 77.80447
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
  • 9.00e3
72.31300
  • 72.31300
  • 69.86562
AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
  • 9.33e3
  • 9.60e3
  • 1.03e4
  • 1.07e4
  • 1.45e4
69.22071
  • 69.22071
  • 68.74497
  • 67.84543
  • 65.60992
  • 64.28068
  • 51.51579
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.51127
  • 64.51127
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.10e4
  • 1.10e4
  • 1.10e4
  • 1.10e4
  • 1.12e4
  • 1.14e4
  • 1.14e4
63.31825
  • 63.31825
  • 63.31825
  • 63.31825
  • 62.48324
  • 61.74627
  • 61.74627
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.11e4
  • 1.11e4
62.92677
  • 62.92677
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.50e4
62.32385
  • 62.32385
  • 49.91628
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
61.43281
  • 61.43281
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
58.56595
  • 58.56595
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.89211
  • 53.89211
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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