D. rerio Gene: exo5 - ENSDARG00000042727 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042727
Nameexo5
Descriptionexonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
OrganismDanio rerio (zebrafish)
Synonym(s)exo v, zgc:123272
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
87.62
  • 87.62
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.63e3
  • 5.63e3
81.15
  • 81.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.77
  • 79.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.20e3
  • 6.20e3
  • 6.70e3
79.26
  • 79.26
  • 77.58
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.20
  • 79.20
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
7.23e3
  • 7.23e3
  • 1.08e4
75.80
  • 75.80
  • 63.82
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.00
  • 72.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
70.99
  • 70.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.71
  • 64.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
  • 1.50e4
62.34
  • 62.34
  • 49.85
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.72
  • 60.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.50e4
60.68
  • 60.68
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.21e4
  • 1.21e4
  • 1.32e4
  • 1.72e4
60.05
  • 60.05
  • 59.58
  • 59.40
  • 55.87
  • 42.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.15
  • 59.15
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.81
  • 53.81
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 1.47e4
52.25
  • 52.25
  • 50.70
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.53
  • 51.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.46e4
  • 1.46e4
  • 1.57e4
51.23
  • 51.23
  • 47.37
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000042727 (exo5)
ZFINZDB-GENE-051113-108 (exo5)
EMBLBC108063, BX908796
Uniprot/SPTREMBLQ32PM0, Q32PM0_DANRE
Uniprot/SWISSPROTEXO5_DANRE, F1Q514

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