D. rerio Gene: yy1a - ENSDARG00000042796 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042796
Nameyy1a
DescriptionYY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
OrganismDanio rerio (zebrafish)
Synonym(s)fb59g10, wu:fa16g07, wu:fb59g10, yy1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
915
  • 915
  • 2.41e3
  • 2.72e3
  • 3.11e3
  • 3.61e3
  • 3.64e3
96.94
  • 96.94
  • 91.93
  • 90.90
  • 89.57
  • 87.90
  • 87.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.18e3
  • 1.18e3
  • 1.29e4
96.05
  • 96.05
  • 56.65
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.41e3
  • 1.41e3
  • 4.40e3
  • 1.15e4
95.29
  • 95.29
  • 85.28
  • 61.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.64e3
  • 1.64e3
94.52
  • 94.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.68e3
  • 1.68e3
94.37
  • 94.37
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.85e3
  • 1.85e3
  • 3.44e3
93.81
  • 93.81
  • 88.49
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
2.15e3
  • 2.15e3
  • 3.10e3
  • 3.39e3
  • 3.81e3
  • 4.30e3
  • 4.44e3
  • 4.45e3
  • 4.90e3
  • 5.09e3
  • 5.27e3
  • 5.69e3
  • 5.80e3
  • 6.03e3
  • 7.36e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.71e3
  • 8.71e3
  • 8.79e3
  • 9.96e3
  • 9.96e3
  • 1.26e4
92.80
  • 92.80
  • 89.61
  • 88.66
  • 87.26
  • 85.60
  • 85.14
  • 85.11
  • 83.59
  • 82.95
  • 82.34
  • 80.95
  • 80.59
  • 79.82
  • 75.35
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 70.82
  • 70.82
  • 70.57
  • 66.65
  • 66.65
  • 57.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.59
  • 92.59
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.30e3
  • 2.30e3
  • 3.29e3
  • 3.39e3
92.31
  • 92.31
  • 88.98
  • 88.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
2.31e3
  • 2.31e3
  • 6.03e3
  • 9.51e3
  • 1.19e4
  • 1.22e4
92.26
  • 92.26
  • 79.80
  • 68.17
  • 59.99
  • 59.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
  • 2.65e3
  • 2.89e3
  • 3.64e3
92.14
  • 92.14
  • 91.12
  • 90.32
  • 87.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
2.42e3
  • 2.42e3
  • 2.57e3
  • 2.61e3
  • 2.86e3
  • 3.11e3
  • 3.99e3
  • 5.18e3
  • 5.69e3
  • 5.76e3
  • 5.76e3
91.89
  • 91.89
  • 91.40
  • 91.27
  • 90.42
  • 89.59
  • 86.66
  • 82.67
  • 80.95
  • 80.73
  • 80.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.43e3
  • 2.43e3
91.86
  • 91.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.58
  • 91.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.13
  • 90.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.04e3
  • 3.04e3
89.83
  • 89.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.42
  • 89.42
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.33e3
  • 3.33e3
88.84
  • 88.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.52
  • 88.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
88.07
  • 88.07
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.73e3
  • 3.73e3
87.51
  • 87.51
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.97e3
  • 3.97e3
86.70
  • 86.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.69
  • 86.69
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.01e3
  • 4.01e3
  • 4.58e3
  • 6.20e3
86.58
  • 86.58
  • 84.67
  • 79.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.71
  • 81.71
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.84e3
  • 5.84e3
  • 6.63e3
80.44
  • 80.44
  • 77.81
AEIR
  • AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.54e3
  • 8.54e3
71.41
  • 71.41
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:2001821notochord posterior region
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again