D. rerio Gene: rnf169 - ENSDARG00000042825 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000042825
Namernf169
Descriptionring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
OrganismDanio rerio (zebrafish)
Synonym(s)fc92e10, wu:fc92e10

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.47
  • 85.47
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
7.71e3
  • 7.71e3
  • 7.90e3
  • 8.74e3
  • 9.28e3
  • 1.00e4
  • 1.04e4
  • 1.04e4
  • 1.11e4
  • 1.13e4
  • 1.15e4
  • 1.15e4
  • 1.20e4
  • 1.32e4
74.18
  • 74.18
  • 73.55
  • 70.72
  • 68.93
  • 66.52
  • 65.24
  • 65.11
  • 62.84
  • 62.03
  • 61.53
  • 61.53
  • 59.88
  • 55.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
7.91e3
  • 7.91e3
  • 8.34e3
  • 1.08e4
  • 1.11e4
  • 1.17e4
  • 1.20e4
  • 1.23e4
  • 1.27e4
  • 1.29e4
  • 1.32e4
73.52
  • 73.52
  • 72.07
  • 63.75
  • 62.84
  • 60.92
  • 59.82
  • 58.89
  • 57.59
  • 56.90
  • 55.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.10e3
  • 8.10e3
  • 9.09e3
72.87
  • 72.87
  • 69.56
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
8.55e3
  • 8.55e3
  • 8.69e3
  • 9.13e3
  • 9.53e3
  • 9.86e3
  • 1.17e4
71.37
  • 71.37
  • 70.91
  • 69.44
  • 68.10
  • 66.98
  • 60.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.67
  • 70.67
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.15e3
  • 9.15e3
69.35
  • 69.35
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.19e3
  • 9.19e3
69.23
  • 69.23
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
9.24e3
  • 9.24e3
  • 9.78e3
  • 1.09e4
69.05
  • 69.05
  • 67.24
  • 63.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
  • 9.58e3
  • 1.02e4
  • 1.17e4
68.21
  • 68.21
  • 67.93
  • 66.00
  • 60.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
66.99
  • 66.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.02e4
  • 1.02e4
  • 1.26e4
65.77
  • 65.77
  • 57.97
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.51
  • 64.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.88
  • 63.88
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.10e4
63.38
  • 63.38
  • 63.33
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.64
  • 62.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.12e4
  • 1.12e4
62.52
  • 62.52
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.15e4
  • 1.15e4
  • 1.17e4
  • 1.27e4
61.40
  • 61.40
  • 60.69
  • 57.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.04
  • 61.04
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.17e4
  • 1.17e4
60.68
  • 60.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.86
  • 59.86
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.21e4
  • 1.21e4
59.46
  • 59.46
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.01
  • 59.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.81
  • 53.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCT027729
EnsemblENSDARG00000042825 (rnf169)
Uniprot/SWISSPROTE7FAP1, RN169_DANRE
ZFINZDB-GENE-030131-4336 (rnf169)

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